Heatmap: Cluster_57 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00258350 (evm_27.TU.AmTr_v1.0_scaffold00002.423)
- -1.61 -3.74 -2.42 0.12 -3.59 0.24 -7.71 1.06 1.11 -0.12 0.23 0.6 2.07 0.98 1.13 -1.08 -1.54 -1.49 -2.63 -1.91 0.3
-2.88 -6.23 -1.7 -0.53 -1.05 -6.39 -0.74 -2.92 1.29 0.76 0.42 0.46 -0.33 0.59 1.88 0.04 -0.08 -0.28 -0.58 -0.61 0.31 0.51
AMTR_s00003p00244050 (evm_27.TU.AmTr_v1.0_scaffold00003.267)
- 0.3 1.45 - -0.67 0.04 0.48 - 1.17 0.25 0.61 -0.57 -1.35 -0.03 -0.71 -0.55 0.42 0.11 -0.29 -0.65 1.08 -0.54
0.07 -5.96 -2.29 -3.19 0.22 -1.5 0.2 -2.77 1.03 0.85 -0.19 0.05 0.41 0.49 0.72 -0.25 0.33 -0.09 -0.14 -0.04 0.4 0.52
AMTR_s00003p00258800 (evm_27.TU.AmTr_v1.0_scaffold00003.328)
0.33 - - -0.34 -0.63 - -0.5 - 1.02 0.42 0.1 0.62 -0.71 0.3 0.44 -0.3 1.01 0.22 -0.3 -0.07 1.21 0.44
AMTR_s00006p00258330 (evm_27.TU.AmTr_v1.0_scaffold00006.205)
-1.38 0.07 1.03 -1.45 -0.13 -1.71 0.4 -2.07 0.28 0.14 0.38 0.28 0.13 0.42 0.45 -0.21 0.42 0.1 0.14 -0.24 -0.83 -0.07
AMTR_s00006p00263490 (evm_27.TU.AmTr_v1.0_scaffold00006.251)
-0.71 0.63 - -1.76 -0.31 -0.35 0.16 -0.57 0.93 0.62 -0.41 -0.38 0.96 0.63 1.09 0.85 -1.82 -1.4 -0.31 -0.35 -0.47 -0.33
AMTR_s00008p00223920 (evm_27.TU.AmTr_v1.0_scaffold00008.145)
-0.08 1.31 0.94 -4.72 0.1 -6.08 0.72 -1.98 0.06 0.01 0.03 0.02 0.4 0.45 0.24 0.03 -0.16 -0.86 -0.4 0.33 -1.48 -0.26
AMTR_s00009p00092310 (evm_27.TU.AmTr_v1.0_scaffold00009.36)
-1.86 -0.56 -0.9 -1.47 0.28 -0.21 0.62 -0.83 0.99 0.6 0.65 0.48 0.2 0.68 0.34 -0.87 0.35 -0.04 -0.39 -1.38 -1.34 0.21
AMTR_s00010p00262060 (evm_27.TU.AmTr_v1.0_scaffold00010.460)
-0.68 -0.5 -0.13 -1.57 -0.03 -0.14 0.75 -2.38 0.73 0.88 0.74 0.45 0.2 0.35 0.12 0.27 -0.01 -0.54 -0.64 -0.66 -0.79 -0.22
0.64 0.26 0.56 -2.06 -0.49 -1.52 0.14 -2.06 -0.36 -0.15 0.31 0.12 0.12 0.84 0.47 0.46 -0.22 -0.14 0.03 0.18 -2.55 0.47
AMTR_s00013p00140650 (evm_27.TU.AmTr_v1.0_scaffold00013.68)
0.66 0.93 1.87 -5.94 0.77 -3.24 -2.21 -1.68 0.88 0.82 1.63 0.9 -0.75 -2.88 -2.61 0.72 -0.69 -3.58 -2.29 -3.56 -3.41 -1.7
-1.89 -1.73 -0.98 -1.37 -0.24 -2.2 -0.06 -2.27 1.36 0.53 0.2 0.09 0.19 0.38 1.04 -0.48 0.74 -0.19 -0.24 0.47 0.31 -0.25
AMTR_s00016p00013560 (evm_27.TU.AmTr_v1.0_scaffold00016.1)
-2.62 -1.0 -0.23 -2.79 -1.09 -7.0 0.48 -9.75 -0.66 -0.21 0.75 0.26 0.8 1.07 0.54 -0.34 1.1 -0.28 -0.05 0.71 -0.49 0.79
AMTR_s00016p00184960 (evm_27.TU.AmTr_v1.0_scaffold00016.147)
0.34 1.5 0.09 -3.18 -1.73 -6.1 0.31 -2.32 0.66 -0.05 0.08 0.24 0.22 1.05 -0.35 0.43 -0.01 -0.27 -1.06 -0.52 -0.42 0.09
AMTR_s00016p00238330 (evm_27.TU.AmTr_v1.0_scaffold00016.245)
0.9 -0.13 0.29 -0.23 -0.05 -0.36 0.83 -3.99 0.12 -0.17 1.01 -0.63 -0.31 0.56 1.14 -1.81 0.69 -0.87 -1.05 -1.13 -1.3 -0.63
1.08 -0.07 -0.04 -2.6 0.21 -0.15 0.87 -1.66 -0.02 -0.1 0.67 -0.38 0.26 0.62 1.26 -1.64 -0.0 -0.68 -0.68 -0.85 -1.72 -0.39
AMTR_s00016p00252670 (evm_27.TU.AmTr_v1.0_scaffold00016.308)
-0.7 0.72 0.55 -4.42 -1.63 -5.01 0.65 -2.18 0.59 0.21 0.28 0.19 0.67 1.29 0.49 -0.34 -0.31 -0.85 -1.08 -0.36 -0.88 0.76
AMTR_s00018p00254770 (evm_27.TU.AmTr_v1.0_scaffold00018.165)
0.12 1.38 1.66 -5.01 -0.14 -2.29 0.08 -0.93 0.0 0.28 -0.25 0.15 0.03 0.26 0.48 -0.83 -0.69 -0.86 -1.0 0.06 -1.56 0.05
-0.48 -2.58 0.44 -2.33 -0.03 -1.03 0.78 -2.26 0.8 0.75 0.58 0.16 0.49 0.31 0.83 -0.41 0.32 -0.45 -0.69 -0.17 -0.95 -0.1
AMTR_s00022p00090650 (evm_27.TU.AmTr_v1.0_scaffold00022.72)
0.79 0.65 0.57 -4.5 -0.63 -4.41 0.59 -4.84 0.79 0.77 0.1 0.28 0.13 0.77 -0.45 -0.77 -0.02 0.51 -0.38 -0.21 -1.56 -0.49
AMTR_s00022p00226500 (evm_27.TU.AmTr_v1.0_scaffold00022.296)
-7.05 0.99 -2.35 -1.07 -0.42 -1.07 -1.07 -0.59 1.78 0.88 -1.17 -0.9 0.29 1.13 0.56 0.33 -2.2 -1.37 -0.52 0.31 -0.81 0.54
AMTR_s00023p00106320 (evm_27.TU.AmTr_v1.0_scaffold00023.52)
-0.55 -2.87 -0.42 -1.71 -0.04 -3.04 0.9 -7.31 0.61 0.65 -0.75 -0.63 -0.12 0.5 0.73 0.81 -1.47 0.21 0.43 -0.18 1.15 0.16
AMTR_s00029p00147460 (evm_27.TU.AmTr_v1.0_scaffold00029.174)
-0.43 -2.64 -7.87 -5.48 -0.62 -2.39 0.17 -5.19 1.36 0.63 0.03 -0.21 0.02 1.31 0.94 0.53 -2.27 -0.99 -0.73 0.62 1.26 -0.03
AMTR_s00029p00220700 (evm_27.TU.AmTr_v1.0_scaffold00029.337)
-1.22 -1.25 0.38 -1.59 -0.68 -6.86 -0.33 -4.25 0.62 0.17 0.5 0.44 0.54 0.63 0.51 0.19 0.69 0.1 -0.05 0.39 -0.07 0.16
AMTR_s00029p00245110 (evm_27.TU.AmTr_v1.0_scaffold00029.434)
-0.27 1.48 0.12 -0.9 0.35 -1.03 0.25 -2.85 -0.01 0.22 0.16 0.13 0.14 0.1 0.41 -0.54 -0.15 -0.63 -0.52 0.56 -1.04 -0.18
AMTR_s00030p00138110 (evm_27.TU.AmTr_v1.0_scaffold00030.87)
-8.39 0.19 1.17 -2.27 -0.35 -7.26 -0.48 -4.03 1.21 0.43 0.47 0.41 0.2 0.72 -0.14 -0.87 0.85 -0.04 -0.25 -0.01 -0.7 -0.02
-0.48 1.08 1.17 -4.0 0.74 -2.84 0.46 -1.73 0.22 0.37 -0.31 -0.32 -1.09 0.61 0.25 -0.25 -1.09 -0.84 -0.61 0.68 -0.15 0.11
AMTR_s00033p00153890 (evm_27.TU.AmTr_v1.0_scaffold00033.99)
-6.7 1.19 1.09 -2.82 -0.22 -5.52 -0.39 -5.32 1.2 0.33 -0.45 -0.82 0.41 1.41 1.14 -1.11 -0.3 -1.06 -1.0 0.16 -1.22 -0.09
AMTR_s00033p00176860 (evm_27.TU.AmTr_v1.0_scaffold00033.127)
- 1.39 - -6.06 0.31 - -0.37 -8.74 1.35 0.1 0.15 0.14 0.44 0.68 1.45 -0.61 0.23 -0.21 -0.36 -0.67 -0.77 0.17
AMTR_s00034p00131640 (evm_27.TU.AmTr_v1.0_scaffold00034.37)
- 0.44 -0.76 -6.04 -0.67 - -1.86 - 1.22 -0.14 -0.19 1.13 0.15 0.15 0.8 0.57 0.25 -0.13 0.27 0.52 0.63 0.11
0.44 -0.43 -0.17 -2.94 -0.82 -4.42 -0.1 -4.15 -0.05 -0.33 0.38 -0.05 0.84 0.67 0.91 0.41 0.65 -0.51 -0.29 0.4 -0.45 0.6
AMTR_s00037p00050960 (evm_27.TU.AmTr_v1.0_scaffold00037.16)
0.66 -2.46 -0.45 -1.3 0.79 -1.44 0.71 -1.53 0.81 0.76 0.02 0.56 0.24 0.29 -0.01 0.02 0.14 -0.31 -0.46 -0.74 -1.01 -0.08
AMTR_s00038p00175780 (evm_27.TU.AmTr_v1.0_scaffold00038.118)
1.03 -0.06 0.16 -1.46 0.44 -3.16 0.29 -3.34 0.75 0.17 0.02 0.31 -0.23 -0.02 0.42 0.33 0.57 0.1 -0.61 -0.83 -1.22 0.05
AMTR_s00044p00106410 (evm_27.TU.AmTr_v1.0_scaffold00044.77)
-8.58 -4.96 0.82 -2.89 0.62 - -0.09 -2.34 0.84 0.49 0.09 1.17 0.21 0.48 -0.27 -0.17 1.04 0.09 0.11 -0.46 -0.54 -0.03
AMTR_s00044p00182230 (evm_27.TU.AmTr_v1.0_scaffold00044.197)
1.29 1.29 -1.1 -1.27 0.4 -6.02 -0.54 - 1.16 0.81 0.75 0.82 0.25 -0.01 -0.09 -0.35 -0.33 -0.86 -1.39 -1.56 -2.05 -0.85
AMTR_s00044p00182740 (evm_27.TU.AmTr_v1.0_scaffold00044.198)
0.4 1.83 -0.12 - 0.65 - -0.76 - 1.24 0.84 1.06 0.56 -0.27 0.13 -0.23 -0.45 -0.44 -2.54 -1.09 -1.67 -0.7 -0.93
0.07 - - -4.33 0.86 -1.66 1.0 -1.35 1.11 1.3 0.51 0.41 0.35 0.29 0.72 -0.21 0.14 -0.06 -0.77 -1.85 -0.8 -0.98
0.53 0.27 0.18 -0.92 -0.56 - -0.03 - 0.43 0.27 0.55 0.91 0.12 0.21 -0.08 -0.05 0.21 0.02 0.07 0.14 -0.62 -0.0
-2.02 -6.13 -7.57 -2.19 0.68 - -0.94 -5.33 1.65 0.43 0.22 0.28 0.33 0.24 0.57 0.2 0.31 -0.29 0.03 0.37 0.45 0.77
-5.7 -2.2 -1.56 -1.99 0.52 -0.3 0.92 -2.94 1.18 1.03 1.08 0.78 0.21 -0.04 0.75 -0.92 -0.2 0.48 -1.07 -0.81 -0.28 -1.78
-0.34 0.68 0.85 -2.41 0.3 -1.42 0.03 -3.45 -0.05 -0.21 0.45 0.72 0.35 0.31 0.15 -0.21 0.06 0.68 0.08 -1.01 -1.02 -0.18
0.1 -0.59 1.04 -1.07 0.74 -4.71 0.47 -3.14 0.27 0.23 0.53 0.28 0.24 0.22 0.49 -0.24 0.32 -0.14 -0.84 -0.57 -1.49 0.2
AMTR_s00062p00170870 (evm_27.TU.AmTr_v1.0_scaffold00062.163)
0.75 0.98 0.25 -2.38 -1.91 0.05 0.39 -6.66 1.47 0.45 0.2 0.23 -1.03 -0.42 -0.78 -1.07 0.39 0.11 -0.23 -0.98 0.36 -0.86
AMTR_s00065p00173110 (evm_27.TU.AmTr_v1.0_scaffold00065.141)
-7.9 0.69 1.26 -6.47 0.33 -4.73 0.18 -3.39 1.21 0.78 0.39 0.26 -0.03 0.3 0.56 -0.85 0.48 -0.24 -0.76 -0.33 -1.99 -0.33
AMTR_s00070p00121170 (evm_27.TU.AmTr_v1.0_scaffold00070.63)
0.13 -0.17 -0.87 -0.66 -0.67 -1.88 -2.05 -2.5 0.75 0.42 -0.88 -0.47 0.26 1.77 0.72 1.0 -0.37 -1.65 -1.04 0.06 -0.77 0.84
AMTR_s00072p00053710 (evm_27.TU.AmTr_v1.0_scaffold00072.22)
-0.75 - -1.16 -3.09 -0.02 - -0.17 -1.15 0.59 -0.08 0.74 0.24 0.93 1.31 0.46 0.23 0.24 0.4 0.09 -0.27 -1.72 0.66
0.99 1.37 -0.15 -4.0 -0.04 -1.32 0.18 -1.28 1.39 0.81 -0.96 -0.56 -0.1 1.13 1.16 -2.23 -0.19 -2.17 -2.38 -1.07 -3.87 -0.83
-0.09 -3.5 -0.58 -3.0 0.69 -5.57 -0.02 -0.87 0.99 0.58 0.52 0.82 0.2 -0.08 0.76 -0.23 0.59 -0.69 -0.71 -1.11 -0.2 0.7
0.65 0.26 0.32 -0.41 0.13 -1.12 0.08 -2.09 -0.18 -0.1 0.33 0.32 0.57 0.43 0.12 -0.23 0.19 -0.1 -0.09 -0.63 -0.97 0.18
AMTR_s00109p00076260 (evm_27.TU.AmTr_v1.0_scaffold00109.59)
0.98 1.08 -0.4 -0.43 -1.24 - -1.46 -2.1 0.09 -0.04 0.22 0.69 0.52 0.4 -0.52 -0.27 0.14 0.57 0.07 -0.64 -0.23 0.21
-0.55 -1.98 -1.64 -5.85 -0.22 -2.23 1.0 -3.41 0.9 0.75 0.7 0.62 -0.09 0.32 0.68 -0.0 0.42 -0.25 -0.07 -0.06 0.36 -0.56
AMTR_s00111p00102100 (evm_27.TU.AmTr_v1.0_scaffold00111.73)
0.87 -0.58 -0.01 -9.46 -0.13 -4.02 0.62 -3.13 1.02 0.53 0.37 0.06 0.45 0.08 0.56 -0.49 -0.11 0.19 0.24 -1.09 -0.1 -0.29
-0.58 -9.86 -0.08 -1.2 -0.32 -5.18 0.24 -3.04 0.24 0.13 0.53 0.69 0.2 0.73 0.78 0.1 0.98 -0.34 -0.25 0.03 0.16 0.2
AMTR_s00130p00058680 (evm_27.TU.AmTr_v1.0_scaffold00130.26)
- 1.79 -0.38 -7.43 -1.04 - 0.47 - 0.65 0.1 -0.2 0.55 0.33 0.39 0.18 0.46 0.41 0.06 -0.62 -0.76 0.01 0.28
- - - - -0.94 - 0.37 -1.81 0.42 0.89 -0.31 1.19 0.38 2.12 -0.4 -0.28 -0.2 0.37 -0.19 0.18 -1.06 0.8
AMTR_s00138p00105620 (evm_27.TU.AmTr_v1.0_scaffold00138.51)
-8.32 0.18 1.46 -5.8 -0.95 -3.67 0.55 -2.1 0.43 0.53 0.12 0.19 0.38 0.68 0.59 0.74 -0.3 -0.91 -0.67 -0.04 -0.55 0.14
AMTR_s00156p00023720 (evm_27.TU.AmTr_v1.0_scaffold00156.6)
0.37 0.87 0.03 -4.6 0.1 -0.48 0.93 -0.8 0.63 0.55 -0.54 -0.06 -0.26 0.81 0.88 -0.71 -0.06 -1.02 -0.9 -0.41 -1.85 -0.26
0.4 0.92 -0.07 -2.14 0.16 -7.13 0.02 -3.25 0.36 0.28 0.06 0.53 -0.04 0.3 -0.02 0.63 0.15 -0.49 -0.02 -0.45 -0.35 0.41
AMTR_s00171p00053780 (evm_27.TU.AmTr_v1.0_scaffold00171.36)
-2.24 - 1.96 - -0.99 -0.3 0.15 - 0.85 0.52 0.86 0.61 -0.22 0.81 0.81 -0.77 0.3 -0.28 -1.41 -3.83 0.16 -1.48

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.