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  5. AMTR_s00032p00183130

AMTR_s00032p00183130 (3-Oct, ATOCT3,...)


Aliases : 3-Oct, ATOCT3, evm_27.TU.AmTr_v1.0_scaffold00032.161

Description : Organic cation/carnitine transporter 3 OS=Arabidopsis thaliana


Gene families : OG0001321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00183130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00167630 AtOCT1, 1-Oct,... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AT1G16370 OCT6, ATOCT6 organic cation/carnitine transporter 6 0.04 OrthoFinder output from all 47 species
Aev_g15197 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70561 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012912001 AtOCT1, 1-Oct Solute transport.carrier-mediated transport.MFS... 0.04 OrthoFinder output from all 47 species
Gb_28866 AtOCT1, 1-Oct organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
Ore_g41926 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g081090.1.1 3-Oct, ATOCT3,... organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
Tin_g41783 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA

No InterPro domains available for this sequence

No external refs found!