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  5. AMTR_s00032p00144550

AMTR_s00032p00144550 (PSAF,...)


Aliases : PSAF, evm_27.TU.AmTr_v1.0_scaffold00032.106

Description : Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaF


Gene families : OG0003277 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00144550
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT1G31330 PSAF photosystem I subunit F 0.32 OrthoFinder output from all 47 species
Adi_g006442 PSAF component *(PsaF) of PS-I complex & original description: none 0.12 OrthoFinder output from all 47 species
Adi_g074178 PSAF component *(PsaF) of PS-I complex & original description: none 0.15 OrthoFinder output from all 47 species
Adi_g115094 PSAF component *(PsaF) of PS-I complex & original description: none 0.12 OrthoFinder output from all 47 species
Adi_g115095 PSAF component *(PsaF) of PS-I complex & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04044 PSAF component *(PsaF) of PS-I complex & original description: none 0.24 OrthoFinder output from all 47 species
Als_g06982 PSAF component *(PsaF) of PS-I complex & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09631 PSAF component *(PsaF) of PS-I complex & original description: none 0.08 OrthoFinder output from all 47 species
Als_g09632 PSAF component *(PsaF) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12154 PSAF component *(PsaF) of PS-I complex & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g14111 PSAF component *(PsaF) of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Aob_g17043 PSAF component *(PsaF) of PS-I complex & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g11160 PSAF component *(PsaF) of PS-I complex & original description: none 0.17 OrthoFinder output from all 47 species
Aop_g11161 PSAF component *(PsaF) of PS-I complex & original description: none 0.16 OrthoFinder output from all 47 species
Aspi01Gene10257.t1 PSAF, Aspi01Gene10257 component *(PsaF) of PS-I complex & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene24373.t1 PSAF, Aspi01Gene24373 component *(PsaF) of PS-I complex & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene35962.t1 PSAF, Aspi01Gene35962 component *(PsaF) of PS-I complex & original description: none 0.14 OrthoFinder output from all 47 species
Ceric.34G046500.1 PSAF, Ceric.34G046500 component *(PsaF) of PS-I complex & original... 0.27 OrthoFinder output from all 47 species
Ceric.39G050300.1 PSAF, Ceric.39G050300 component *(PsaF) of PS-I complex & original... 0.21 OrthoFinder output from all 47 species
Cre09.g412100 PSAF Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.23 OrthoFinder output from all 47 species
Dac_g15768 PSAF component *(PsaF) of PS-I complex & original description: none 0.19 OrthoFinder output from all 47 species
Dcu_g11078 PSAF component *(PsaF) of PS-I complex & original description: none 0.13 OrthoFinder output from all 47 species
Dcu_g17964 PSAF component *(PsaF) of PS-I complex & original description: none 0.26 OrthoFinder output from all 47 species
Dde_g46310 PSAF component *(PsaF) of PS-I complex & original description: none 0.13 OrthoFinder output from all 47 species
Ehy_g02142 PSAF component *(PsaF) of PS-I complex & original description: none 0.14 OrthoFinder output from all 47 species
Gb_12253 PSAF component PsaF of PS-I complex 0.21 OrthoFinder output from all 47 species
LOC_Os03g56670.1 PSAF, LOC_Os03g56670 component PsaF of PS-I complex 0.25 OrthoFinder output from all 47 species
Len_g23521 PSAF component *(PsaF) of PS-I complex & original description: none 0.18 OrthoFinder output from all 47 species
Len_g23522 PSAF component *(PsaF) of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Len_g41938 PSAF component *(PsaF) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
MA_10090427g0010 PSAF component PsaF of PS-I complex 0.16 OrthoFinder output from all 47 species
Mp2g02960.1 PSAF component PsaF of PS-I complex 0.3 OrthoFinder output from all 47 species
Msp_g07626 PSAF component *(PsaF) of PS-I complex & original description: none 0.13 OrthoFinder output from all 47 species
Msp_g44062 PSAF component *(PsaF) of PS-I complex & original description: none 0.14 OrthoFinder output from all 47 species
Nbi_g05634 PSAF component *(PsaF) of PS-I complex & original description: none 0.17 OrthoFinder output from all 47 species
Pir_g09286 PSAF component *(PsaF) of PS-I complex & original description: none 0.14 OrthoFinder output from all 47 species
Pp3c21_8800V3.1 PSAF, Pp3c21_8800 photosystem I subunit F 0.14 OrthoFinder output from all 47 species
Pp3c22_10850V3.1 PSAF, Pp3c22_10850 photosystem I subunit F 0.1 OrthoFinder output from all 47 species
Ppi_g05989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06720 PSAF component *(PsaF) of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g19172 PSAF component *(PsaF) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29954 PSAF component *(PsaF) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35668 PSAF component *(PsaF) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0206.g025755 PSAF component *(PsaF) of PS-I complex & original... 0.11 OrthoFinder output from all 47 species
Smo75361 PSAF Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.13 OrthoFinder output from all 47 species
Solyc02g069450.3.1 PSAF, Solyc02g069450 component PsaF of PS-I complex 0.23 OrthoFinder output from all 47 species
Solyc02g069460.3.1 PSAF, Solyc02g069460 component PsaF of PS-I complex 0.24 OrthoFinder output from all 47 species
Spa_g14850 PSAF component *(PsaF) of PS-I complex & original description: none 0.18 OrthoFinder output from all 47 species
Spa_g22602 PSAF component *(PsaF) of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g51789 PSAF component *(PsaF) of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g54641 PSAF component *(PsaF) of PS-I complex & original description: none 0.13 OrthoFinder output from all 47 species
Tin_g08936 PSAF component *(PsaF) of PS-I complex & original description: none 0.18 OrthoFinder output from all 47 species
Tin_g31834 PSAF component *(PsaF) of PS-I complex & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005867_P001 PSAF, Zm00001e005867 component PsaF of PS-I complex 0.16 OrthoFinder output from all 47 species
Zm00001e011931_P001 PSAF, Zm00001e011931 component PsaF of PS-I complex 0.23 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
CC GO:0009538 photosystem I reaction center IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005960 glycine cleavage complex IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003666 PSI_PsaF 49 220
No external refs found!