Aliases : VPS53, HIT1, ATVPS53
Description : component *(VPS53/HIT1) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes & original description: none
Gene families : OG0003936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003936_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00092p00123760 | VPS53, HIT1,... | Vesicle trafficking.target membrane tethering.GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
AT1G50500 | VPS53, HIT1, ATVPS53 | Membrane trafficking VPS53 family protein | 0.05 | OrthoFinder output from all 47 species | |
Ala_g31947 | VPS53, HIT1, ATVPS53 | component *(VPS53/HIT1) of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
Als_g01928 | VPS53, HIT1, ATVPS53 | component *(VPS53/HIT1) of GARP/EARP... | 0.06 | OrthoFinder output from all 47 species | |
Aop_g00781 | VPS53, HIT1, ATVPS53 | component *(VPS53/HIT1) of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0010.g012081 | VPS53, HIT1, ATVPS53 | component *(VPS53/HIT1) of GARP/EARP... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.34G024900.1 | VPS53, HIT1,... | component *(VPS53/HIT1) of GARP/EARP... | 0.09 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020554.46 | VPS53, HIT1, ATVPS53 | Vesicle trafficking.target membrane tethering.GARP/EARP... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g22740 | VPS53, HIT1, ATVPS53 | component *(VPS53/HIT1) of GARP/EARP... | 0.11 | OrthoFinder output from all 47 species | |
Ehy_g01626 | VPS53, HIT1, ATVPS53 | component *(VPS53/HIT1) of GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01016094001 | VPS53, HIT1, ATVPS53 | Vesicle trafficking.target membrane tethering.GARP/EARP... | 0.09 | OrthoFinder output from all 47 species | |
LOC_Os01g67880.1 | VPS53, HIT1,... | component VPS53/HIT1 of GARP/EARP... | 0.07 | OrthoFinder output from all 47 species | |
Lfl_g04212 | VPS53, HIT1, ATVPS53 | component *(VPS53/HIT1) of GARP/EARP... | 0.07 | OrthoFinder output from all 47 species | |
Mp8g18200.1 | VPS53, HIT1, ATVPS53 | component VPS53/HIT1 of GARP/EARP... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g15917 | No alias | component *(VPS53/HIT1) of GARP/EARP... | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g049490.3.1 | VPS53, HIT1,... | component VPS53/HIT1 of GARP/EARP... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e018920_P001 | VPS53, HIT1,... | component VPS53/HIT1 of GARP/EARP... | 0.11 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | HCCA |
MF | GO:0005096 | GTPase activator activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
MF | GO:0008047 | enzyme activator activity | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0015693 | magnesium ion transport | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
CC | GO:0030117 | membrane coat | IEP | HCCA |
CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | HCCA |
CC | GO:0030120 | vesicle coat | IEP | HCCA |
CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
CC | GO:0030131 | clathrin adaptor complex | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007234 | Vps53_N | 4 | 428 |
No external refs found! |