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  5. AMTR_s00025p00131080

AMTR_s00025p00131080 (ATEIF3G1, EIF3G1,...)


Aliases : ATEIF3G1, EIF3G1, evm_27.TU.AmTr_v1.0_scaffold00025.129

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component


Gene families : OG0002732 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002732_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00131080

Target Alias Description ECC score Gene Family Method Actions
Als_g02340 ATEIF3G1, EIF3G1 component *(eIF3g) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Cba_g68737 ATEIF3G1, EIF3G1 component *(eIF3g) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g03648 ATEIF3G1, EIF3G1 component *(eIF3g) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01034107001 ATEIF3G1, EIF3G1 Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Mp6g13130.1 ATEIF3G1, EIF3G1 component eIF3g of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
Nbi_g21812 ATEIF3G1, EIF3G1 component *(eIF3g) of eIF3 mRNA-to-PIC binding complex &... 0.06 OrthoFinder output from all 47 species
Tin_g45798 ATEIF3G1, EIF3G1 component *(eIF3g) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e021823_P001 ATEIF3G1,... component eIF3g of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR024675 eIF3g_N 31 162
IPR000504 RRM_dom 217 283
No external refs found!