Sequence Description Alias PCC hrr AMTR_s00179p00011640 MPK20, ATMPK20, evm_27.TU.AmTr_v1.0_scaffold00179.1 0.9053466131151954 5 AMTR_s00011p00262800 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.SAWADEE transcription factor evm_27.TU.AmTr_v1.0_scaffold00011.199 0.8951518963886659 2 AMTR_s00089p00034850 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN2 regulatory component evm_27.TU.AmTr_v1.0_scaffold00089.9 0.8939337859485733 31 AMTR_s00099p00093470 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Nop1/fibrillarin methyltransferase component FIB1, ATFIB1, ATFBR1, FBR1, SKIP7, evm_27.TU.AmTr_v1.0_scaffold00099.70 0.8920294428519008 4 AMTR_s00133p00101570 DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.46 0.8887321335991089 17 AMTR_s00303p00010520 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group MPK20, ATMPK20, evm_27.TU.AmTr_v1.0_scaffold00303.1 0.8843302788479006 39 AMTR_s00119p00124540 Protein translocation.mitochondrion.outer mitochondrion membrane TOM translocation system.Tom40 component TOM40, evm_27.TU.AmTr_v1.0_scaffold00119.97 0.8842277211315753 29 AMTR_s00049p00198350 Protein modification.phosphorylation.AGC kinase superfamily.AGC-VIII kinase D6PKL2, PK5, evm_27.TU.AmTr_v1.0_scaffold00049.210 0.8833076384391699 8 AMTR_s00002p00206060 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3d component evm_27.TU.AmTr_v1.0_scaffold00002.205 0.8812177008334495 13 AMTR_s00036p00181640 Protein biosynthesis.translation initiation.mRNA loading.eIF4A mRNA unwinding factor EIF4A-2, evm_27.TU.AmTr_v1.0_scaffold00036.91 0.8807259425699021 10 AMTR_s00105p00058690 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RACK1 associated component RACK1B_AT, evm_27.TU.AmTr_v1.0_scaffold00105.26 0.877952816730955 16 AMTR_s00019p00255470 Protein biosynthesis.translation elongation.eEF1B eEF1A-GDP-recycling complex.eEF1B-gamma component evm_27.TU.AmTr_v1.0_scaffold00019.442 0.8761186734821714 93 AMTR_s00002p00263460 Flowering locus K homology domain OS=Arabidopsis thaliana FLK, evm_27.TU.AmTr_v1.0_scaffold00002.479 0.8713120322367799 23 AMTR_s00017p00257730 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS7 component evm_27.TU.AmTr_v1.0_scaffold00017.290 0.8703205840181224 21 AMTR_s00032p00133570 Protein biosynthesis.translation elongation.eEF2 mRNA-translocation factor LOS1, evm_27.TU.AmTr_v1.0_scaffold00032.93 0.8700150432740458 15 AMTR_s00019p00256050 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3c component EIF3C, EIF3C-1, ATTIF3C1, TIF3C1, ATEIF3C-1, evm_27.TU.AmTr_v1.0_scaffold00019.448 0.8697485867142192 59 AMTR_s00010p00265700 RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.513 0.8696281818736142 36 AMTR_s00111p00143660 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component evm_27.TU.AmTr_v1.0_scaffold00111.124 0.869442475241844 28 AMTR_s00046p00133890 evm_27.TU.AmTr_v1.0_scaffold00046.67 0.8676120687591854 21 AMTR_s00082p00169320 RNA biosynthesis.transcriptional activation.GeBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00082.40 0.8675637682363724 62 AMTR_s00002p00165660 RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase regulatory protein evm_27.TU.AmTr_v1.0_scaffold00002.139 0.8664257732075785 21 AMTR_s00084p00172980 Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.FREE1 associated protein evm_27.TU.AmTr_v1.0_scaffold00084.46 0.8654691362873924 22 AMTR_s00107p00143110 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.PTB-type splicing factor PTB2, ATPTB2, evm_27.TU.AmTr_v1.0_scaffold00107.42 0.8650729448840232 23 AMTR_s00142p00104490 evm_27.TU.AmTr_v1.0_scaffold00142.68 0.8641955374594881 24 AMTR_s00025p00204100 Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia evm_27.TU.AmTr_v1.0_scaffold00025.262 0.8635930152128065 99 AMTR_s00013p00226180 UPF0235 protein At5g63440 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00013.170 0.8635609762802813 26 AMTR_s00091p00066640 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL19 component evm_27.TU.AmTr_v1.0_scaffold00091.17 0.8633947765860361 47 AMTR_s00062p00161920 Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana ATRBP45A, RBP45A, evm_27.TU.AmTr_v1.0_scaffold00062.151 0.8630797244239821 28 AMTR_s00021p00110500 UBP1-associated protein 2C OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.59 0.8622933574396193 29 AMTR_s00005p00263980 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).DDX5 pre-mRNA splicing regulator evm_27.TU.AmTr_v1.0_scaffold00005.216 0.8617404525162912 30 AMTR_s00072p00117380 Cell division control protein 48 homolog D OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.59 0.8613128931093081 49 AMTR_s00028p00246730 Protein modification.phosphorylation.TKL kinase superfamily.LRR-X kinase families.LRR-Xa kinase evm_27.TU.AmTr_v1.0_scaffold00028.142 0.8609221395719289 33 AMTR_s00175p00061780 Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana PTB3, evm_27.TU.AmTr_v1.0_scaffold00175.34 0.860538338427732 59 AMTR_s00002p00269760 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00002.558 0.8603248868254663 57 AMTR_s00019p00206980 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.246 0.8559720764901882 38 AMTR_s00001p00220200 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.alpha subunit evm_27.TU.AmTr_v1.0_scaffold00001.228 0.8530826127536693 69 AMTR_s00089p00089760 evm_27.TU.AmTr_v1.0_scaffold00089.47 0.8515950021167457 42 AMTR_s00013p00225150 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL17 component evm_27.TU.AmTr_v1.0_scaffold00013.166 0.8461258466529923 45 AMTR_s00007p00189640 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RSZ32/33 splicing factor RSZ33, AT-RS2Z33, RS2Z33, ATRSZ33, evm_27.TU.AmTr_v1.0_scaffold00007.159 0.8410217842837875 48 AMTR_s00013p00091760 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.SWA3/RH36 assembly factor AtRH36, SWA3, RH36, evm_27.TU.AmTr_v1.0_scaffold00013.42 0.8399636993485365 49 AMTR_s00109p00118420 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NUG1/NSN1 regulatory GTPase evm_27.TU.AmTr_v1.0_scaffold00109.117 0.8398938039038374 83 AMTR_s00001p00273090 Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.593 0.8382136756925482 83 AMTR_s00011p00224870 Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core components.carbonic anhydrase component GAMMA CA1, evm_27.TU.AmTr_v1.0_scaffold00011.101 0.8370482876441965 81 AMTR_s00041p00116460 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.NSR splicing regulator evm_27.TU.AmTr_v1.0_scaffold00041.81 0.836069701510616 55 AMTR_s00156p00043680 evm_27.TU.AmTr_v1.0_scaffold00156.20 0.8359333151025097 56 AMTR_s00038p00238890 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS6 component RPS6A, RPS6, evm_27.TU.AmTr_v1.0_scaffold00038.246 0.8353385795822292 57 AMTR_s00022p00238440 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit evm_27.TU.AmTr_v1.0_scaffold00022.334 0.8338958544886796 90 AMTR_s00155p00028780 Protein PAT1 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.12 0.8338008694161811 59 AMTR_s00003p00196050 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI8 component VIP3, evm_27.TU.AmTr_v1.0_scaffold00003.177 0.832521453244259 62 AMTR_s00071p00150630 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.RNPS1 component RNPS1, SR45, evm_27.TU.AmTr_v1.0_scaffold00071.136 0.8319665302798773 83 AMTR_s00056p00135710 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS7 component evm_27.TU.AmTr_v1.0_scaffold00056.107 0.8296735046978844 66 AMTR_s00025p00085190 Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.66 0.8279371982034996 95 AMTR_s00025p00241980 Cell wall.cellulose.synthesis.cellulose synthase complex (CSC).CSC-interacting proteins.STELLO-type CSC-interactive protein evm_27.TU.AmTr_v1.0_scaffold00025.371 0.8272258759137086 68 AMTR_s00149p00054910 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00149.35 0.826979003913583 72 AMTR_s00021p00059810 Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate (PEP) carboxylase activity.PEP carboxylase PEPC1, ATPEPC1, ATPPC1, PPC1, evm_27.TU.AmTr_v1.0_scaffold00021.28 0.8263882829943069 71 AMTR_s00035p00187610 Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00035.40 0.8247251324393063 73 AMTR_s00096p00079870 DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana ATDRH1, DRH1, evm_27.TU.AmTr_v1.0_scaffold00096.33 0.8240660259198471 75 AMTR_s00024p00040890 evm_27.TU.AmTr_v1.0_scaffold00024.14 0.8232548622492233 79 AMTR_s00016p00246090 RNA processing.messenger ribonucleoprotein particle (mRNP).stress granule.TSN ribonuclease Tudor1, AtTudor1, TSN1, evm_27.TU.AmTr_v1.0_scaffold00016.281 0.8226442789701588 81 AMTR_s00001p00271430 Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana PFU2, UBC23, evm_27.TU.AmTr_v1.0_scaffold00001.488 0.8223728077706088 84 AMTR_s00029p00143630 Protein modification.protein folding and quality control.NAC ribosome-associated chaperone complex.beta subunit evm_27.TU.AmTr_v1.0_scaffold00029.167 0.8194108405714027 88 AMTR_s00061p00036160 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.Hsp90 protein HSP81-3, Hsp81.3, AtHsp90-3, AtHsp90.3 0.8190489102942274 89 AMTR_s00017p00035550 RNA biosynthesis.transcriptional activation.TCP transcription factor evm_27.TU.AmTr_v1.0_scaffold00017.13 0.8189086202507434 90 AMTR_s00073p00163500 evm_27.TU.AmTr_v1.0_scaffold00073.47 0.8187150111726924 93 AMTR_s00025p00215680 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00025.292 0.8185124799179565 94 AMTR_s00021p00254700 Protein translocation.mitochondrion.inner mitochondrion membrane TIM translocation system.Tim17 component ATTIM17-2, TIM17-2, TIM17, evm_27.TU.AmTr_v1.0_scaffold00021.299 0.817795552288764 96 AMTR_s00062p00160630 Protein translocation.peroxisome.importomer translocation system.cargo-receptor docking complex.Pex13 component APM2, PEX13, evm_27.TU.AmTr_v1.0_scaffold00062.150 0.8176178790940164 97 AMTR_s00006p00266790 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.UAfT nucleotide sugar transporter evm_27.TU.AmTr_v1.0_scaffold00006.292 0.814902758664178 99 AMTR_s00056p00074670 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.NUP35 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00056.54 0.8146702503404841 100