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  5. AMTR_s00024p00220440

AMTR_s00024p00220440 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.215

Description : Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.electron donor-binding subcomplex E.NdhU component


Gene families : OG0009119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00220440

Target Alias Description ECC score Gene Family Method Actions
AT5G21430 No alias Chaperone DnaJ-domain superfamily protein 0.1 OrthoFinder output from all 47 species
Aev_g00596 No alias component *(NdhU) of NDH electron donor-binding... 0.1 OrthoFinder output from all 47 species
Ala_g27216 No alias component *(NdhU) of NDH electron donor-binding... 0.05 OrthoFinder output from all 47 species
Als_g17763 No alias component *(NdhU) of NDH electron donor-binding... 0.03 OrthoFinder output from all 47 species
Aob_g31323 No alias component *(NdhU) of NDH electron donor-binding... 0.05 OrthoFinder output from all 47 species
Aop_g15652 No alias component *(NdhU) of NDH electron donor-binding... 0.06 OrthoFinder output from all 47 species
Aspi01Gene50041.t1 Aspi01Gene50041 component *(NdhU) of NDH electron donor-binding... 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007899 No alias component *(NdhU) of NDH electron donor-binding... 0.03 OrthoFinder output from all 47 species
Cba_g74294 No alias component *(NdhU) of NDH electron donor-binding... 0.02 OrthoFinder output from all 47 species
Ceric.01G130500.1 Ceric.01G130500 component *(NdhU) of NDH electron donor-binding... 0.04 OrthoFinder output from all 47 species
Dcu_g11382 No alias component *(NdhU) of NDH electron donor-binding... 0.08 OrthoFinder output from all 47 species
Dde_g03697 No alias component *(NdhU) of NDH electron donor-binding... 0.06 OrthoFinder output from all 47 species
GSVIVT01035454001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.1 OrthoFinder output from all 47 species
LOC_Os12g31460.1 LOC_Os12g31460 component NdhU of NDH electron donor-binding subcomplex E 0.05 OrthoFinder output from all 47 species
Len_g41767 No alias component *(NdhU) of NDH electron donor-binding... 0.06 OrthoFinder output from all 47 species
Lfl_g11791 No alias component *(NdhU) of NDH electron donor-binding... 0.08 OrthoFinder output from all 47 species
Mp2g09770.1 No alias component NdhU of NDH electron donor-binding subcomplex E 0.06 OrthoFinder output from all 47 species
Msp_g10562 No alias component *(NdhU) of NDH electron donor-binding... 0.04 OrthoFinder output from all 47 species
Ore_g10531 No alias component *(NdhU) of NDH electron donor-binding... 0.03 OrthoFinder output from all 47 species
Pir_g00310 No alias component *(NdhU) of NDH electron donor-binding... 0.03 OrthoFinder output from all 47 species
Pnu_g33172 No alias component *(NdhU) of NDH electron donor-binding... 0.05 OrthoFinder output from all 47 species
Ppi_g25348 No alias component *(NdhU) of NDH electron donor-binding... 0.1 OrthoFinder output from all 47 species
Sam_g16511 No alias component *(NdhU) of NDH electron donor-binding... 0.04 OrthoFinder output from all 47 species
Sam_g23601 No alias component *(NdhU) of NDH electron donor-binding... 0.04 OrthoFinder output from all 47 species
Solyc06g082970.3.1 Solyc06g082970 component NdhU of NDH electron donor-binding subcomplex E 0.06 OrthoFinder output from all 47 species
Spa_g42281 No alias component *(NdhU) of NDH electron donor-binding... 0.03 OrthoFinder output from all 47 species
Tin_g00489 No alias component *(NdhU) of NDH electron donor-binding... 0.09 OrthoFinder output from all 47 species
Zm00001e039624_P001 Zm00001e039624 component NdhU of NDH electron donor-binding subcomplex E 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!