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  5. AMTR_s00024p00190710

AMTR_s00024p00190710 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.156

No description available


Gene families : OG0002235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002235_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00190710
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Aop_g04396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G036300.1 Ceric.03G036300 not classified & original description: pacid=50571482... 0.02 OrthoFinder output from all 47 species
LOC_Os07g47660.1 LOC_Os07g47660 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_90136g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_956300g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g03272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55876 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015345 No alias not classified & original description: CDS=1-375 0.04 OrthoFinder output from all 47 species
Solyc12g099500.2.1 Solyc12g099500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g37580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001624_P001 Zm00001e001624 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!