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  5. AMTR_s00024p00108110

AMTR_s00024p00108110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.55

No description available


Gene families : OG0011355 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011355_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00108110
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT2G39518 No alias Uncharacterised protein family (UPF0497) 0.08 OrthoFinder output from all 47 species
AT2G39530 No alias Uncharacterised protein family (UPF0497) 0.04 OrthoFinder output from all 47 species
GSVIVT01016540001 No alias CASP-like protein 4D1 OS=Ricinus communis 0.03 OrthoFinder output from all 47 species
LOC_Os11g34730.1 LOC_Os11g34730 CASP-like protein 4D1 OS=Oryza sativa subsp. japonica... 0.1 OrthoFinder output from all 47 species
Solyc03g098090.2.1 Solyc03g098090 CASP-like protein 4D1 OS=Ricinus communis... 0.04 OrthoFinder output from all 47 species
Solyc04g011480.3.1 Solyc04g011480 CASP-like protein PIMP1 OS=Capsicum annuum... 0.07 OrthoFinder output from all 47 species
Solyc04g051270.2.1 Solyc04g051270 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc06g072350.3.1 Solyc06g072350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g006455.1.1 Solyc11g006455 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008219 cell death IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 5 101
No external refs found!