AMTR_s00023p00186390 (RPT1, PHOT1, NPH1,...)

Aliases : RPT1, PHOT1, NPH1, JK224, evm_27.TU.AmTr_v1.0_scaffold00023.124

Description : External stimuli response.light.UV-A/blue light.phototropin-mediated photoperception.phototropin photoreceptor

Gene families : OG0001978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001978_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00023p00186390
Cluster	HCCA: Cluster_102

Target	Alias	Description	ECC score	Gene Family Method
AT5G58140	NPL1, PHOT2	phototropin 2	0.03	OrthoFinder output from all 47 species
Adi_g058675	NPL1, PHOT2	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aev_g14738	NPL1, PHOT2	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ala_g06933	NPL1, PHOT2	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Aob_g34028	NPL1, PHOT2	EC_2.7 transferase transferring phosphorus-containing...	0.08	OrthoFinder output from all 47 species
Aop_g09145	NPL1, PHOT2	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Cba_g16281	NPL1, PHOT2	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ceric.24G066200.1	NPL1, PHOT2,...	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Dac_g09160	NPL1, PHOT2	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Dcu_g03160	NPL1, PHOT2	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dde_g08279	NPL1, PHOT2	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ehy_g07913	NPL1, PHOT2	EC_2.7 transferase transferring phosphorus-containing...	0.06	OrthoFinder output from all 47 species
LOC_Os04g23890.2	NPL1, PHOT2,...	protein kinase (AGC-VIII). phototropin light receptor....	0.03	OrthoFinder output from all 47 species
Len_g08807	NPL1, PHOT2	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Lfl_g09211	NPL1, PHOT2	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
MA_178953g0010	RPT1, PHOT1, NPH1, JK224	phototropin light receptor. phototropin photoreceptor	0.02	OrthoFinder output from all 47 species
Pir_g17424	NPL1, PHOT2	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ppi_g08339	NPL1, PHOT2	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ppi_g32597	RPT1, PHOT1, NPH1, JK224	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Sam_g50260	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Solyc01g097770.4.1	NPL1, PHOT2,...	protein kinase (AGC-VIII). phototropin light receptor....	0.04	OrthoFinder output from all 47 species
Solyc11g072710.3.1	RPT1, PHOT1,...	phototropin light receptor. phototropin photoreceptor	0.02	OrthoFinder output from all 47 species
Zm00001e004261_P003	NPL1, PHOT2,...	protein kinase (AGC-VIII). phototropin light receptor....	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004345	glucose-6-phosphate dehydrogenase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0016987	sigma factor activity	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
MF	GO:0030976	thiamine pyrophosphate binding	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
MF	GO:0050997	quaternary ammonium group binding	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
MF	GO:1901681	sulfur compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	707	992

External Links

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AMTR_s00023p00186390 (RPT1, PHOT1, NPH1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation