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  5. AMTR_s00022p00242310

AMTR_s00022p00242310 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.351

Description : Protein modification.peptide maturation.plastid.CtpA carboxy-terminal processing peptidase


Gene families : OG0001069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00242310

Target Alias Description ECC score Gene Family Method Actions
Adi_g019837 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.02 OrthoFinder output from all 47 species
Adi_g057553 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.02 OrthoFinder output from all 47 species
Ala_g06322 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.05 OrthoFinder output from all 47 species
Als_g01017 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.04 OrthoFinder output from all 47 species
Aob_g05172 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.06 OrthoFinder output from all 47 species
Aop_g14243 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043303 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0318.g064395 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.04 OrthoFinder output from all 47 species
Cba_g08933 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.02 OrthoFinder output from all 47 species
Ceric.35G069200.1 Ceric.35G069200 carboxy-terminal processing peptidase *(CtpA) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000900.16 No alias Carboxyl-terminal-processing peptidase 2, chloroplastic... 0.03 OrthoFinder output from all 47 species
Cre10.g420550 No alias Protein modification.peptide maturation.plastid.CtpA... 0.02 OrthoFinder output from all 47 species
Dcu_g09112 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.02 OrthoFinder output from all 47 species
Dde_g11824 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g07816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19495 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.06 OrthoFinder output from all 47 species
Ehy_g30564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001855001 No alias Protein modification.peptide maturation.plastid.CtpA... 0.04 OrthoFinder output from all 47 species
GSVIVT01021388001 No alias Protein modification.peptide maturation.plastid.CtpA... 0.08 OrthoFinder output from all 47 species
GSVIVT01033332001 No alias Protein modification.peptide maturation.plastid.CtpA... 0.02 OrthoFinder output from all 47 species
Gb_35902 No alias Carboxyl-terminal-processing peptidase 2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Len_g01280 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.07 OrthoFinder output from all 47 species
Len_g15226 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g10534 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g30878 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.05 OrthoFinder output from all 47 species
MA_10432212g0020 No alias Carboxyl-terminal-processing peptidase 1, chloroplastic... 0.01 OrthoFinder output from all 47 species
MA_74926g0010 No alias Carboxyl-terminal-processing peptidase 3, chloroplastic... 0.07 OrthoFinder output from all 47 species
MA_9566g0010 No alias Carboxyl-terminal-processing peptidase 3, chloroplastic... 0.06 OrthoFinder output from all 47 species
Msp_g07773 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.06 OrthoFinder output from all 47 species
Msp_g10757 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.02 OrthoFinder output from all 47 species
Ore_g20885 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.03 OrthoFinder output from all 47 species
Pir_g04557 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g02086 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014864 No alias not classified & original description: CDS=20-1393 0.04 OrthoFinder output from all 47 species
Sam_g19129 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.02 OrthoFinder output from all 47 species
Smo143443 No alias Protein modification.peptide maturation.plastid.CtpA... 0.03 OrthoFinder output from all 47 species
Solyc12g097030.2.1 Solyc12g097030 carboxy-terminal processing peptidase (CtpA) 0.04 OrthoFinder output from all 47 species
Spa_g07720 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.05 OrthoFinder output from all 47 species
Spa_g16639 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13798 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e036922_P004 Zm00001e036922 carboxy-terminal processing peptidase (CtpA) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005151 Tail-specific_protease 302 464
IPR001478 PDZ 188 259
No external refs found!