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  5. AMTR_s00022p00221290

AMTR_s00022p00221290 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.278

Description : Clustered mitochondria protein OS=Arabidopsis thaliana


Gene families : OG0004309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00221290

Target Alias Description ECC score Gene Family Method Actions
AT3G52140 No alias tetratricopeptide repeat (TPR)-containing protein 0.03 OrthoFinder output from all 47 species
Aev_g34698 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.02 OrthoFinder output from all 47 species
Als_g18932 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27903 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.03 OrthoFinder output from all 47 species
Als_g55079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25626.t2 Aspi01Gene25626 regulatory protein *(FRIENDLY) of mitochondrion division... 0.02 OrthoFinder output from all 47 species
Azfi_s0017.g014488 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.04 OrthoFinder output from all 47 species
Ceric.02G073000.1 Ceric.02G073000 regulatory protein *(FRIENDLY) of mitochondrion division... 0.05 OrthoFinder output from all 47 species
Dcu_g04144 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.05 OrthoFinder output from all 47 species
GSVIVT01032046001 No alias Clustered mitochondria protein OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
LOC_Os02g48620.2 LOC_Os02g48620 Clustered mitochondria protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g02461 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.04 OrthoFinder output from all 47 species
MA_10427006g0010 No alias Clustered mitochondria protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp6g08800.1 No alias Clustered mitochondria protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g02498 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.04 OrthoFinder output from all 47 species
Ore_g28877 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.03 OrthoFinder output from all 47 species
Solyc01g086750.4.1 Solyc01g086750 Clustered mitochondria protein OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e015654_P001 Zm00001e015654 Clustered mitochondria protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006471 obsolete protein ADP-ribosylation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR025697 CLU_dom 559 701
IPR025697 CLU_dom 415 499
No external refs found!