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  5. AMTR_s00021p00241150

AMTR_s00021p00241150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.251

No description available


Gene families : OG0000463 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000463_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00241150
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G64450 No alias Glycine-rich protein family 0.08 OrthoFinder output from all 47 species
AT3G54200 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Aev_g36982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18928 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g35014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69758 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05497.t1 Aspi01Gene05497 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17497.t1 Aspi01Gene17497 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58683.t1 Aspi01Gene58683 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58684.t1 Aspi01Gene58684 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G010700.1 Ceric.04G010700 not classified & original description: pacid=50630724... 0.03 OrthoFinder output from all 47 species
Ceric.18G048500.1 Ceric.18G048500 not classified & original description: pacid=50622192... 0.05 OrthoFinder output from all 47 species
Ceric.23G075500.1 Ceric.23G075500 not classified & original description: pacid=50611410... 0.02 OrthoFinder output from all 47 species
Dac_g12719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13488 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g03594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_17477 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g53705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_406287g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g06270.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g13106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g33842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006134 No alias not classified & original description: CDS=1-957 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020255 No alias not classified & original description: CDS=1-648 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021071 No alias not classified & original description: CDS=1-585 0.04 OrthoFinder output from all 47 species
Solyc08g082470.1.1 Solyc08g082470 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Spa_g55924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010492_P001 Zm00001e010492 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019888_P001 Zm00001e019888 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027143_P001 Zm00001e027143 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e027455_P001 Zm00001e027455 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 74 175
No external refs found!