AMTR_s00019p00179020 (GLR2.7, ATGLR2.7,...)

Aliases : GLR2.7, ATGLR2.7, evm_27.TU.AmTr_v1.0_scaffold00019.183

Description : Solute transport.channels.GLR ligand-gated cation channel

Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00019p00179020

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00106p00119030	GLR2.3,...	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
AT2G24710	GLR2.3, ATGLR2.3	glutamate receptor 2.3	0.05	OrthoFinder output from all 47 species
Adi_g002041	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g22377	GLR3.6, ATGLR3.6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g07200	ATGLR3.2,...	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g31440	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene54274.t1	GLR3.3,...	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01014245001	GLR2.7, ATGLR2.7	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
GSVIVT01033139001	GLR2.7, ATGLR2.7	Solute transport.channels.GLR ligand-gated cation channel	0.05	OrthoFinder output from all 47 species
LOC_Os09g26144.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
Lfl_g16287	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g25499	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc07g052390.3.1	GLR3.7,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Zm00001e032648_P001	ATGLR3.5, GLR6,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	Interproscan
MF	GO:0005215	transporter activity	IEA	Interproscan
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated monoatomic ion channel activity	None	Extended
MF	GO:0005231	excitatory extracellular ligand-gated monoatomic ion channel activity	None	Extended
MF	GO:0005234	extracellularly glutamate-gated ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	IEA	Interproscan
MF	GO:0008066	glutamate receptor activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated monoatomic ion channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated monoatomic ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0030288	outer membrane-bounded periplasmic space	IEA	Interproscan
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
CC	GO:0042597	periplasmic space	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0015035	protein-disulfide reductase activity	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0016668	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0047134	protein-disulfide reductase (NAD(P)) activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001828	ANF_lig-bd_rcpt	2	301
IPR001320	Iontro_rcpt_C	492	746
IPR001638	Solute-binding_3/MltF_N	388	710

External Links

No external refs found!

AMTR_s00019p00179020 (GLR2.7, ATGLR2.7,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation