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  5. AMTR_s00016p00207540

AMTR_s00016p00207540 (ATGP4,...)


Aliases : ATGP4, evm_27.TU.AmTr_v1.0_scaffold00016.176

Description : Protein degradation.peptide tagging.Membrane-anchored-Ubiquitin (MUB)-anchor addition.MUB ubiquitin-fold protein


Gene families : OG0001418 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001418_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00207540

Target Alias Description ECC score Gene Family Method Actions
AT3G01050 MUB1 membrane-anchored ubiquitin-fold protein 1 precursor 0.03 OrthoFinder output from all 47 species
Adi_g022486 MUB6 MUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06766 MUB6 MUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16071 MUB6 MUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34885 MUB6 MUB ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z001800.1 MUB6, Ceric.1Z001800 MUB ubiquitin-fold protein & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01033043001 MUB4 Protein degradation.peptide... 0.02 OrthoFinder output from all 47 species
LOC_Os02g51500.1 MUB6, LOC_Os02g51500 ubiquitin-fold protein (MUB) 0.03 OrthoFinder output from all 47 species
Pnu_g04090 MUB6 MUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011184 MUB6 MUB ubiquitin-fold protein & original description: CDS=152-505 0.03 OrthoFinder output from all 47 species
Sam_g01074 No alias MUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g088620.3.1 MUB2, Solyc02g088620 ubiquitin-fold protein (MUB) 0.03 OrthoFinder output from all 47 species
Solyc12g056900.2.1 MUB6, Solyc12g056900 ubiquitin-fold protein (MUB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!