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  5. AMTR_s00016p00165790

AMTR_s00016p00165790 (VAN3, SFC, AGD3,...)


Aliases : VAN3, SFC, AGD3, evm_27.TU.AmTr_v1.0_scaffold00016.123

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class I ARF-GAP protein


Gene families : OG0002309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00165790

Target Alias Description ECC score Gene Family Method Actions
AT1G10870 AGD4 ARF-GAP domain 4 0.03 OrthoFinder output from all 47 species
Aev_g02576 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene66868.t1 VAN3, SFC, AGD3,... class I ARF-GAP ARF-GTPase-activating protein & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0026.g023397 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.02 OrthoFinder output from all 47 species
Dcu_g11040 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01001079001 VAN3, SFC, AGD3 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Lfl_g11485 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.02 OrthoFinder output from all 47 species
Mp1g10820.1 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein 0.03 OrthoFinder output from all 47 species
Ppi_g06978 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.02 OrthoFinder output from all 47 species
Sam_g06279 No alias class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Solyc05g023750.3.1 VAN3, SFC, AGD3,... class I ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005543 phospholipid binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR001849 PH_domain 285 417
IPR004148 BAR_dom 65 207
IPR001164 ArfGAP_dom 495 633
IPR020683 DUF3447 732 798
No external refs found!