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  5. AMTR_s00012p00263620

AMTR_s00012p00263620 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.346

No description available


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00263620

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263580 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00022p00036270 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00059p00175720 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G27660 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT2G37820 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT2G42060 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT2G44400 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT5G43520 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
Ala_g12004 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11277.t1 Aspi01Gene11277 E3 ubiquitin ligase *(AIRP1) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14055.t1 Aspi01Gene14055 E3 ubiquitin ligase *(AIRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G071100.1 Ceric.18G071100 E3 ubiquitin ligase *(AIRP1) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z042300.1 Ceric.1Z042300 E3 ubiquitin ligase *(AIRP1) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g10112 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02288 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01025366001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g68460.1 LOC_Os01g68460 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g41890.1 LOC_Os07g41890 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g41910.1 LOC_Os07g41910 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g41980.1 LOC_Os07g41980 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os07g42040.1 LOC_Os07g42040 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g31250.1 LOC_Os08g31250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g20150.1 LOC_Os09g20150 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g31980.1 LOC_Os09g31980 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_18827g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_18827g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_251691g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_4432g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g01055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g55965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g073820.4.1 Solyc01g073820 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g073840.1.1 Solyc01g073840 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc01g073860.3.1 Solyc01g073860 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc03g097960.1.1 Solyc03g097960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g072460.1.1 Solyc06g072460 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g011270.4.1 Solyc09g011270 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc12g038680.1.1 Solyc12g038680 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e038822_P001 Zm00001e038822 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0047134 protein-disulfide reductase (NAD(P)) activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0008987 quinolinate synthetase A activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009435 NAD biosynthetic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019674 NAD metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!