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  5. AMTR_s00012p00228710

AMTR_s00012p00228710 (CCB452,...)


Aliases : CCB452, evm_27.TU.AmTr_v1.0_scaffold00012.181

Description : Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein OS=Arabidopsis thaliana


Gene families : OG0010200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00228710
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT2G07815 No alias BEST Arabidopsis thaliana protein match is: cytochrome C... 0.08 OrthoFinder output from all 47 species
ATMG00180 CCB452 cytochrome C biogenesis 452 0.07 OrthoFinder output from all 47 species
Gb_01757 CCB452 Cytochrome c biogenesis CcmF C-terminal-like... 0.07 OrthoFinder output from all 47 species
Solyc00g500167.1.1 Solyc00g500167 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc00g500241.1.1 CCB452, Solyc00g500241 Cytochrome c biogenesis CcmF C-terminal-like... 0.08 OrthoFinder output from all 47 species
Zm00001e042200_P001 CCB452, Zm00001e042200 Cytochrome c biogenesis CcmF C-terminal-like... 0.02 OrthoFinder output from all 47 species
Zm00001e042201_P001 CCB452, Zm00001e042201 Cytochrome c biogenesis CcmF C-terminal-like... 0.02 OrthoFinder output from all 47 species
Zm00001e042313_P001 CCB452, Zm00001e042313 Cytochrome c biogenesis CcmF C-terminal-like... 0.02 OrthoFinder output from all 47 species
Zm00001e042314_P001 CCB452, Zm00001e042314 Cytochrome c biogenesis CcmF C-terminal-like... 0.02 OrthoFinder output from all 47 species
Zm00001e042392_P001 CCB452, Zm00001e042392 Cytochrome c biogenesis CcmF C-terminal-like... 0.02 OrthoFinder output from all 47 species
Zm00001e042398_P001 CCB452, Zm00001e042398 Cytochrome c biogenesis CcmF C-terminal-like... 0.02 OrthoFinder output from all 47 species
Zm00001e042422_P001 CCB452, Zm00001e042422 Cytochrome c biogenesis CcmF C-terminal-like... 0.02 OrthoFinder output from all 47 species
Zm00001e042430_P001 CCB452, Zm00001e042430 Cytochrome c biogenesis CcmF C-terminal-like... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0008535 respiratory chain complex IV assembly IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0042773 ATP synthesis coupled electron transport IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!