AMTR_s00011p00253850 (HAN, MNP, GATA18,...)

Aliases : HAN, MNP, GATA18, evm_27.TU.AmTr_v1.0_scaffold00011.164

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor

Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00011p00253850
Cluster	HCCA: Cluster_49

Target	Alias	Description	ECC score	Gene Family Method
AT2G45050	GATA2	GATA transcription factor 2	0.03	OrthoFinder output from all 47 species
AT4G34680	GATA3	GATA transcription factor 3	0.05	OrthoFinder output from all 47 species
Adi_g010084	GATA22, CGA1, GNL	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g016252	GATA4	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g021303	GATA4	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g022369	GATA4	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g035600	GATA5	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g036776	GATA5	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g058312	GATA4	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g059846	GATA4	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g081466	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g082687	GATA5	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g116352	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g17574	GATA9	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g05894	GATA12	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g14739	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g14957	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g09937	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g11812	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g20978	GATA9	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g38669	GATA2	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g48899	GATA4	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g21032	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g23859	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g09752	GATA9	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene06728.t1	GNC, GATA21,...	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene07094.t1	GATA2, Aspi01Gene07094	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene07249.t1	GATA9, Aspi01Gene07249	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene30025.t1	GATA5, Aspi01Gene30025	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene57616.t1	GATA5, Aspi01Gene57616	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene60517.t1	GATA20, Aspi01Gene60517	transcription factor *(A/B-GATA) & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene61259.t1	GATA15, Aspi01Gene61259	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene67105.t1	GATA5, Aspi01Gene67105	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene69106.t1	GATA4, Aspi01Gene69106	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene69371.t1	GATA12, Aspi01Gene69371	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0115.g046216	GATA9	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Cba_g02619	GATA2	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g30967	GATA5	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.04G070700.1	GATA20, Ceric.04G070700	transcription factor *(A/B-GATA) & original description:...	0.06	OrthoFinder output from all 47 species
Ceric.07G063400.1	GATA12, Ceric.07G063400	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.18G043900.1	GATA15, Ceric.18G043900	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.25G025900.1	GATA9, Ceric.25G025900	transcription factor *(A/B-GATA) & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.27G027400.1	GATA12, Ceric.27G027400	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Cre10.g435450	GATA1	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
Dac_g06612	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g06887	GATA2	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g11115	GATA9	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g12986	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g15306	GATA9	transcription factor *(A/B-GATA) & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g05496	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g08197	GATA1	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g18348	GATA1	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g20942	GATA15	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g26819	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g26857	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g28792	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01024194001	GATA5	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
GSVIVT01033385001	GATA9	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01035614001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.05	OrthoFinder output from all 47 species
Gb_25568	GATA20	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
LOC_Os02g56250.1	BME3-ZF, BME3,...	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
LOC_Os03g05160.1	BME3-ZF, BME3,...	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
LOC_Os05g49280.1	GATA20, LOC_Os05g49280	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
LOC_Os09g08150.1	LOC_Os09g08150	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os10g32070.1	GATA1, LOC_Os10g32070	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
LOC_Os12g07120.1	GATA14, LOC_Os12g07120	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Len_g08386	GATA12	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Len_g24180	GATA12	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Len_g46521	GATA5	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g28449	GATA5	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
MA_103421g0030	GATA5	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Msp_g06252	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g02094	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g26719	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g29813	GATA9	transcription factor *(A/B-GATA) & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g30519	GATA2	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g37666	BME3-ZF, BME3, GATA8	transcription factor *(A/B-GATA) & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g02097	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g06282	GATA5	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g07533	GATA15	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003575	GATA15	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009072	GATA4	transcription factor *(A/B-GATA) & original description:...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0211.g025929	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description:...	0.04	OrthoFinder output from all 47 species
Solyc01g090760.4.1	GATA4, Solyc01g090760	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Solyc02g062760.4.1	HAN, MNP,...	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Solyc08g066510.3.1	GATA12, Solyc08g066510	transcription factor (GATA)	0.05	OrthoFinder output from all 47 species
Solyc10g018560.2.1	GATA4, Solyc10g018560	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
Spa_g06254	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g15861	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g43678	GATA12	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e005940_P001	GATA4, Zm00001e005940	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Zm00001e015260_P001	GATA5, Zm00001e015260	transcription factor (GATA)	0.07	OrthoFinder output from all 47 species
Zm00001e016165_P001	BME3-ZF, BME3,...	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Zm00001e020243_P001	GATA20, Zm00001e020243	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Zm00001e026256_P001	GATA23, Zm00001e026256	transcription factor (GATA)	0.05	OrthoFinder output from all 47 species
Zm00001e026601_P001	GATA20, Zm00001e026601	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
Zm00001e029060_P002	GATA9, Zm00001e029060	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Zm00001e032513_P001	Zm00001e032513	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Zm00001e037876_P002	GATA4, Zm00001e037876	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0045735	nutrient reservoir activity	IEP	HCCA
MF	GO:0051087	chaperone binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	92	126

External Links

No external refs found!

AMTR_s00011p00253850 (HAN, MNP, GATA18,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation