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Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.433
Description : Pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00006p00257350 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00009p00215930 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00252350 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g22690... | 0.01 | OrthoFinder output from all 47 species | |
| AMTR_s00122p00121750 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00177p00030580 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00276p00017800 | OTP81,... | Pentatricopeptide repeat-containing protein At2g29760,... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G26540 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G59600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g033617 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g047468 | LPA66 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g072273 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g46730 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g07468 | EMB2261 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g11078 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g16530 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g25745 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g30557 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g35628 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g55750 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g59722 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g08381 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27898 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g03749 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g07588 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g23385 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene01199.t1 | OTP86, Aspi01Gene01199 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene01654.t1 | PTAC9, OSB2,... | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene03412.t2 | Aspi01Gene03412 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene10387.t1 | REME1, Aspi01Gene10387 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene11731.t1 | Aspi01Gene11731 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene12659.t1 | Aspi01Gene12659 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene14838.t1 | Aspi01Gene14838 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene18019.t1 | Aspi01Gene18019 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene18385.t1 | OTP82, Aspi01Gene18385 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene20496.t1 | CRR22, Aspi01Gene20496 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene20498.t1 | CRR2, Aspi01Gene20498 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene28051.t1 | Aspi01Gene28051 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene29787.t2 | Aspi01Gene29787 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene31801.t2 | Aspi01Gene31801 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34811.t1 | Aspi01Gene34811 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene35154.t1 | Aspi01Gene35154 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene56180.t1 | EMB2758, Aspi01Gene56180 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene67429.t1 | Aspi01Gene67429 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011478 | No alias | not classified & original description: CDS=1-2919 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0090.g042642 | No alias | not classified & original description: CDS=39-695 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0092.g042964 | No alias | not classified & original description: CDS=1-1536 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0444.g070598 | EMB2758 | not classified & original description: CDS=1-1605 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0551.g076599 | No alias | not classified & original description: CDS=1-1686 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0889.g091250 | No alias | not classified & original description: CDS=1-2652 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g12399 | DOT4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g35117 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g36067 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67889 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67900 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G019000.1 | Ceric.02G019000 | not classified & original description: pacid=50585115... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.19G003900.1 | Ceric.19G003900 | not classified & original description: pacid=50575192... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.32G057100.1 | Ceric.32G057100 | not classified & original description: pacid=50598475... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.35G035600.1 | Ceric.35G035600 | not classified & original description: pacid=50580802... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08450 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g40867 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g05943 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g06677 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g26344 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07460 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g17701 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g19510 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008721001 | No alias | Pentatricopeptide repeat-containing protein At5g40410,... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01015461001 | ABCG40, PDR12,... | Solute transport.primary active transport.ABC... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g51790.1 | LOC_Os01g51790 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g09274 | DOT4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g13048 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18535 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g19007 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g33767 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g44704 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g54500 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05574 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10428509g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.01 | OrthoFinder output from all 47 species | |
| MA_60579g0010 | OTP84 | Pentatricopeptide repeat-containing protein At2g22070... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g04332 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g17283 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g28017 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g28692 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g44842 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g15416 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g15684 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g12341 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18756 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19065 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g23954 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g37149 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05733 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g29397 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g32866 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53175 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53384 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g61597 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g004138 | No alias | not classified & original description: CDS=1-2646 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0010.g004758 | No alias | not classified & original description: CDS=1-2223 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007831 | No alias | not classified & original description: CDS=364-1791 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0072.g016959 | No alias | not classified & original description: CDS=1-1596 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0080.g017968 | No alias | not classified & original description: CDS=1-2673 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0151.g023411 | REME1 | not classified & original description: CDS=1-1494 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0214.g026000 | No alias | not classified & original description: CDS=66-1799 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0223.g026268 | No alias | not classified & original description: CDS=1-2328 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0226.g026331 | No alias | not classified & original description: CDS=1-2598 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g03385 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g26490 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29223 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo125795 | REME1 | Pentatricopeptide repeat-containing protein At2g13600... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc02g011680.4.1 | Solyc02g011680 | Pentatricopeptide repeat-containing protein At5g27110... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g33897 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g04113 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g05031 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06042 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g14557 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17613 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g17876 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g22903 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g23280 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g31798 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g44231 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g46155 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 529 | 555 |
| IPR002885 | Pentatricopeptide_repeat | 200 | 222 |
| IPR002885 | Pentatricopeptide_repeat | 330 | 360 |
| IPR002885 | Pentatricopeptide_repeat | 769 | 797 |
| IPR002885 | Pentatricopeptide_repeat | 301 | 323 |
| IPR002885 | Pentatricopeptide_repeat | 703 | 726 |
| IPR002885 | Pentatricopeptide_repeat | 627 | 675 |
| IPR002885 | Pentatricopeptide_repeat | 425 | 472 |
| No external refs found! |