AMTR_s00010p00231750 (OBF4, TGA4,...)

Aliases : OBF4, TGA4, evm_27.TU.AmTr_v1.0_scaffold00010.267

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.TGA transcription factor activity.TGA transcription factor

Gene families : OG0000342 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000342_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00010p00231750

Target	Alias	Description	ECC score	Gene Family Method
AT1G22070	TGA3	TGA1A-related gene 3	0.03	OrthoFinder output from all 47 species
AT5G65210	TGA1	bZIP transcription factor family protein	0.03	OrthoFinder output from all 47 species
Adi_g107228	TGA2, AHBP-1B	NPR1-interactive transcription factor *(TGA) & original...	0.03	OrthoFinder output from all 47 species
Ala_g25198	TGA2, AHBP-1B	TGA-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g04452	TGA2, AHBP-1B	TGA-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g12150	TGA2, AHBP-1B	NPR1-interactive transcription factor *(TGA) & original...	0.02	OrthoFinder output from all 47 species
Ceric.23G021100.1	TGA2, AHBP-1B,...	TGA-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g03328	TGA2, AHBP-1B	NPR1-interactive transcription factor *(TGA) & original...	0.03	OrthoFinder output from all 47 species
Dac_g32541	TGA2, AHBP-1B	TGA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g04779	TGA2, AHBP-1B	TGA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g15547	TGA2, AHBP-1B	TGA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01036134001	bZIP21, TGA9	RNA biosynthesis.transcriptional activation.bZIP...	0.03	OrthoFinder output from all 47 species
LOC_Os01g65970.1	PAN, LOC_Os01g65970	Transcription factor TGAL3 OS=Oryza sativa subsp....	0.03	OrthoFinder output from all 47 species
LOC_Os02g10140.1	TGA10, bZIP65,...	transcription factor (bZIP). transcription factor (TGA)	0.03	OrthoFinder output from all 47 species
LOC_Os04g54474.1	OBF4, TGA4,...	transcription factor (bZIP). transcription factor (TGA)	0.06	OrthoFinder output from all 47 species
LOC_Os08g07970.1	OBF4, TGA4,...	transcription factor (bZIP). transcription factor (TGA)	0.02	OrthoFinder output from all 47 species
MA_10428126g0010	TGA2, AHBP-1B	transcription factor (TGA)	0.02	OrthoFinder output from all 47 species
MA_130907g0010	bZIP21, TGA9	transcription factor (bZIP). transcription factor (TGA)....	0.03	OrthoFinder output from all 47 species
Msp_g08857	TGA2, AHBP-1B	TGA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g29962	TGA2, AHBP-1B	TGA-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Solyc04g011670.3.1	TGA1, Solyc04g011670	transcription factor (bZIP). transcription factor (TGA)	0.06	OrthoFinder output from all 47 species
Solyc04g054320.4.1	TGA1, Solyc04g054320	transcription factor (bZIP). transcription factor (TGA)	0.03	OrthoFinder output from all 47 species
Solyc10g078670.3.1	TGA10, bZIP65,...	transcription factor (bZIP). transcription factor (TGA)	0.02	OrthoFinder output from all 47 species
Solyc12g056860.2.1	TGA1, Solyc12g056860	transcription factor (bZIP). transcription factor (TGA)	0.06	OrthoFinder output from all 47 species
Spa_g13898	TGA2, AHBP-1B	TGA-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g22901	TGA2, AHBP-1B	TGA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g29437	TGA2, AHBP-1B	NPR1-interactive transcription factor *(TGA) & original...	0.02	OrthoFinder output from all 47 species
Zm00001e006810_P004	OBF4, TGA4,...	transcription factor (bZIP). transcription factor (TGA)	0.04	OrthoFinder output from all 47 species
Zm00001e014085_P001	TGA10, bZIP65,...	transcription factor (bZIP). transcription factor (TGA)	0.02	OrthoFinder output from all 47 species
Zm00001e024141_P002	bZIP21, TGA9,...	transcription factor (bZIP). transcription factor (TGA)	0.04	OrthoFinder output from all 47 species
Zm00001e030941_P001	PAN, Zm00001e030941	transcription factor (bZIP). transcription factor (TGA)	0.03	OrthoFinder output from all 47 species
Zm00001e041747_P002	TGA1, Zm00001e041747	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	HCCA
BP	GO:0006541	glutamine metabolic process	IEP	HCCA
BP	GO:0006542	glutamine biosynthetic process	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016211	ammonia ligase activity	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	76	120
IPR025422	TGA_domain	164	241

External Links

No external refs found!

AMTR_s00010p00231750 (OBF4, TGA4,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation