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  5. AMTR_s00009p00263550

AMTR_s00009p00263550 (GCN3, ATGCN3,...)


Aliases : GCN3, ATGCN3, evm_27.TU.AmTr_v1.0_scaffold00009.359

Description : ABC transporter F family member 3 OS=Arabidopsis thaliana


Gene families : OG0006468 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006468_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00263550

Target Alias Description ECC score Gene Family Method Actions
Aop_g04328 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.98 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre11.g478128 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dde_g21674 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.03 OrthoFinder output from all 47 species
LOC_Os02g58020.1 GCN3, ATGCN3,... ABC transporter F family member 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g24940 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.03 OrthoFinder output from all 47 species
Mp7g18200.1 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Sam_g27059 No alias regulatory protein *(GCN20) of eIF2-alpha kinase... 0.03 OrthoFinder output from all 47 species
Smo175495 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Tin_g02806 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 547 654
IPR003439 ABC_transporter-like_ATP-bd 290 371
No external refs found!