LOC_Os09g26810.1


Description : component LHCa6 of LHC-I complex


Gene families : OG_01_0000035 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000035_tree ,
OG_02_0001318 (LandPlants) Phylogenetic Tree(s): OG_02_0001318_tree ,
OG_03_0004198 (SeedPlants) Phylogenetic Tree(s): OG_03_0004198_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g26810.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00251360 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.04 Archaeplastida
AMTR_s00009p00268360 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.08 Archaeplastida
AMTR_s00010p00264770 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.08 Archaeplastida
AMTR_s00013p00180670 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.07 Archaeplastida
AMTR_s00029p00239610 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.1 Archaeplastida
AMTR_s00045p00069220 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
AMTR_s00045p00069900 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.07 Archaeplastida
AMTR_s00061p00059490 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.08 Archaeplastida
AMTR_s00088p00153020 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.07 Archaeplastida
AMTR_s00099p00139960 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.07 Archaeplastida
AMTR_s00131p00114510 evm_27.TU.AmTr_v1... Photosystem I chlorophyll a/b-binding protein 6,... 0.07 Archaeplastida
AMTR_s00153p00078810 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.05 Archaeplastida
AMTR_s00175p00040360 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.08 Archaeplastida
AMTR_s00189p00032350 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.05 Archaeplastida
AT1G19150 LHCA2*1, LHCA6 photosystem I light harvesting complex gene 6 0.1 Archaeplastida
AT1G45474 LHCA5 photosystem I light harvesting complex gene 5 0.06 Archaeplastida
Cre01.g066917 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
Cre06.g272650 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.04 Archaeplastida
Cre06.g278213 No alias Chlorophyll a-b binding protein P4, chloroplastic... 0.01 Archaeplastida
Cre06.g283050 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.03 Archaeplastida
Cre07.g344950 No alias Photosystem I chlorophyll a/b-binding protein 5,... 0.03 Archaeplastida
Cre10.g425900 No alias Chlorophyll a-b binding protein 4, chloroplastic... 0.02 Archaeplastida
Cre10.g452050 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.01 Archaeplastida
Cre11.g467573 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 Archaeplastida
Cre12.g508750 No alias Photosystem I chlorophyll a/b-binding protein 6,... 0.02 Archaeplastida
Cre16.g673650 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
Cre16.g687900 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 Archaeplastida
Cre17.g720250 No alias Photosynthesis.photophosphorylation.photosystem... 0.01 Archaeplastida
GSVIVT01007988001 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.05 Archaeplastida
GSVIVT01009498001 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.05 Archaeplastida
GSVIVT01010483001 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.06 Archaeplastida
GSVIVT01013450001 No alias Photosynthesis.photophosphorylation.photosystem... 0.06 Archaeplastida
GSVIVT01015045001 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.09 Archaeplastida
GSVIVT01016295001 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.04 Archaeplastida
GSVIVT01019377001 No alias Photosystem I chlorophyll a/b-binding protein 3-1,... 0.04 Archaeplastida
GSVIVT01021406001 No alias Chlorophyll a-b binding protein 2, chloroplastic... 0.02 Archaeplastida
GSVIVT01029789001 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
GSVIVT01030053001 No alias Chlorophyll a-b binding protein 151, chloroplastic... 0.03 Archaeplastida
Gb_10163 No alias component LHCa3 of LHC-I complex 0.03 Archaeplastida
Gb_18375 No alias component LHCa1 of LHC-I complex 0.02 Archaeplastida
Gb_27633 No alias component LHCb6 of LHC-II complex 0.02 Archaeplastida
Gb_30379 No alias Chlorophyll a-b binding protein CP26, chloroplastic... 0.04 Archaeplastida
Gb_32082 No alias component LHCa2 of LHC-I complex 0.05 Archaeplastida
Gb_38595 No alias component LHCb4 of LHC-II complex 0.03 Archaeplastida
MA_10431300g0010 No alias Chlorophyll a-b binding protein type I, chloroplastic... 0.02 Archaeplastida
MA_10431300g0020 No alias component LHCb1/2/3 of LHC-II complex 0.04 Archaeplastida
MA_10431493g0010 No alias component LHCa1 of LHC-I complex 0.03 Archaeplastida
MA_129206g0010 No alias component LHCb4 of LHC-II complex 0.03 Archaeplastida
MA_176279g0010 No alias component LHCb5 of LHC-II complex 0.05 Archaeplastida
MA_18273g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_65346g0010 No alias Chlorophyll a-b binding protein P4, chloroplastic... 0.02 Archaeplastida
MA_815900g0010 No alias component LHCa3 of LHC-I complex 0.04 Archaeplastida
MA_9388552g0010 No alias Chlorophyll a-b binding protein type 2 member 2... 0.02 Archaeplastida
MA_97315g0010 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Mp1g29620.1 No alias component LHCb1/2/3 of LHC-II complex 0.06 Archaeplastida
Mp2g15420.1 No alias component LHCa1 of LHC-I complex 0.03 Archaeplastida
Mp3g07840.1 No alias component LHCa4 of LHC-I complex 0.02 Archaeplastida
Mp4g00930.1 No alias component LHCa3 of LHC-I complex 0.03 Archaeplastida
Mp4g10900.1 No alias component LHCb5 of LHC-II complex 0.03 Archaeplastida
Mp6g01650.1 No alias component LHCb6 of LHC-II complex 0.02 Archaeplastida
Mp7g05890.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Mp7g06750.1 No alias component LHCb1/2/3 of LHC-II complex 0.05 Archaeplastida
Mp7g06760.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Mp7g06770.1 No alias component LHCb1/2/3 of LHC-II complex 0.07 Archaeplastida
Mp7g06780.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Mp7g08940.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Archaeplastida
Mp7g09180.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Mp8g13180.1 No alias component LHCa2 of LHC-I complex 0.03 Archaeplastida
Pp3c10_25360V3.1 No alias photosystem I light harvesting complex gene 2 0.02 Archaeplastida
Pp3c10_25450V3.1 No alias photosystem I light harvesting complex gene 2 0.02 Archaeplastida
Pp3c12_19200V3.1 No alias photosystem I light harvesting complex gene 2 0.12 Archaeplastida
Pp3c12_25430V3.1 No alias light harvesting complex photosystem II 0.02 Archaeplastida
Pp3c12_25460V3.1 No alias light harvesting complex photosystem II 0.02 Archaeplastida
Pp3c13_14980V3.1 No alias photosystem I light harvesting complex gene 1 0.02 Archaeplastida
Pp3c16_16040V3.1 No alias photosystem I light harvesting complex gene 3 0.03 Archaeplastida
Pp3c19_20900V3.1 No alias light-harvesting chlorophyll B-binding protein 3 0.02 Archaeplastida
Pp3c1_34240V3.1 No alias light harvesting complex photosystem II subunit 6 0.02 Archaeplastida
Pp3c21_3950V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 Archaeplastida
Pp3c22_5610V3.1 No alias photosystem II light harvesting complex gene 2.1 0.05 Archaeplastida
Pp3c2_36190V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 Archaeplastida
Pp3c2_36500V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 Archaeplastida
Pp3c4_11854V3.1 No alias photosystem I light harvesting complex gene 5 0.1 Archaeplastida
Pp3c4_28370V3.1 No alias light harvesting complex of photosystem II 5 0.02 Archaeplastida
Pp3c4_5690V3.1 No alias light harvesting complex photosystem II 0.03 Archaeplastida
Pp3c6_6830V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 Archaeplastida
Smo104804 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
Smo149722 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 Archaeplastida
Smo160411 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 Archaeplastida
Smo423144 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.05 Archaeplastida
Smo444370 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
Smo446130 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 Archaeplastida
Smo75552 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
Solyc07g022900.4.1 No alias component LHCa5 of LHC-I complex 0.06 Archaeplastida
Solyc09g014520.3.1 No alias component LHCb4 of LHC-II complex 0.02 Archaeplastida
Solyc12g009200.2.1 No alias component LHCa6 of LHC-I complex 0.1 Archaeplastida
Zm00001e004129_P001 No alias component LHCa4 of LHC-I complex 0.04 Archaeplastida
Zm00001e004940_P001 No alias component LHCb1/2/3 of LHC-II complex 0.05 Archaeplastida
Zm00001e004941_P001 No alias component LHCb1/2/3 of LHC-II complex 0.05 Archaeplastida
Zm00001e006561_P001 No alias component LHCb6 of LHC-II complex 0.1 Archaeplastida
Zm00001e009885_P001 No alias component LHCa6 of LHC-I complex 0.15 Archaeplastida
Zm00001e010547_P001 No alias component LHCb4 of LHC-II complex 0.04 Archaeplastida
Zm00001e011045_P002 No alias component LHCb5 of LHC-II complex 0.05 Archaeplastida
Zm00001e013742_P001 No alias component LHCa1 of LHC-I complex 0.07 Archaeplastida
Zm00001e015945_P001 No alias component LHCa5 of LHC-I complex 0.08 Archaeplastida
Zm00001e021290_P001 No alias component LHCb5 of LHC-II complex 0.05 Archaeplastida
Zm00001e022453_P001 No alias component LHCa4 of LHC-I complex 0.05 Archaeplastida
Zm00001e025141_P001 No alias component LHCa1 of LHC-I complex 0.05 Archaeplastida
Zm00001e026547_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e032450_P001 No alias Chlorophyll a-b binding protein, chloroplastic OS=Zea... 0.06 Archaeplastida
Zm00001e034922_P001 No alias Chlorophyll a-b binding protein 1, chloroplastic OS=Zea... 0.05 Archaeplastida
Zm00001e035235_P001 No alias component LHCb4 of LHC-II complex 0.06 Archaeplastida
Zm00001e035249_P001 No alias component LHCb1/2/3 of LHC-II complex 0.04 Archaeplastida
Zm00001e035349_P002 No alias component LHCa2 of LHC-I complex 0.06 Archaeplastida
Zm00001e041918_P001 No alias component LHCb6 of LHC-II complex 0.06 Archaeplastida
AMTR_s00010p00264770 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.08 LandPlants
AMTR_s00013p00180670 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.06 LandPlants
AMTR_s00131p00114510 evm_27.TU.AmTr_v1... Photosystem I chlorophyll a/b-binding protein 6,... 0.06 LandPlants
AT1G19150 LHCA2*1, LHCA6 photosystem I light harvesting complex gene 6 0.09 LandPlants
GSVIVT01007988001 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.03 LandPlants
GSVIVT01010483001 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.04 LandPlants
GSVIVT01015045001 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.08 LandPlants
Gb_32082 No alias component LHCa2 of LHC-I complex 0.02 LandPlants
MA_65346g0010 No alias Chlorophyll a-b binding protein P4, chloroplastic... 0.02 LandPlants
Mp3g07840.1 No alias component LHCa4 of LHC-I complex 0.01 LandPlants
Mp8g13180.1 No alias component LHCa2 of LHC-I complex 0.02 LandPlants
Pp3c12_19200V3.1 No alias photosystem I light harvesting complex gene 2 0.1 LandPlants
Solyc12g009200.2.1 No alias component LHCa6 of LHC-I complex 0.09 LandPlants
Zm00001e004129_P001 No alias component LHCa4 of LHC-I complex 0.03 LandPlants
Zm00001e009885_P001 No alias component LHCa6 of LHC-I complex 0.15 LandPlants
Zm00001e022453_P001 No alias component LHCa4 of LHC-I complex 0.04 LandPlants
Zm00001e035349_P002 No alias component LHCa2 of LHC-I complex 0.05 LandPlants
AMTR_s00013p00180670 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.06 SeedPlants
AMTR_s00131p00114510 evm_27.TU.AmTr_v1... Photosystem I chlorophyll a/b-binding protein 6,... 0.06 SeedPlants
AT1G19150 LHCA2*1, LHCA6 photosystem I light harvesting complex gene 6 0.09 SeedPlants
GSVIVT01010483001 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.04 SeedPlants
GSVIVT01015045001 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.08 SeedPlants
Gb_32082 No alias component LHCa2 of LHC-I complex 0.02 SeedPlants
Solyc12g009200.2.1 No alias component LHCa6 of LHC-I complex 0.09 SeedPlants
Zm00001e009885_P001 No alias component LHCa6 of LHC-I complex 0.16 SeedPlants
Zm00001e035349_P002 No alias component LHCa2 of LHC-I complex 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 68 234
No external refs found!