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  5. AMTR_s00009p00221230

AMTR_s00009p00221230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.159

No description available


Gene families : OG0004768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004768_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00221230
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Ala_g14031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23567.t1 Aspi01Gene23567 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g31927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os09g39770.1 LOC_Os09g39770 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g21514 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_418720g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g025340.1.1 Solyc03g025340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e009457_P001 Zm00001e009457 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 3 87
No external refs found!