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  5. AMTR_s00009p00043530

AMTR_s00009p00043530 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.8

Description : Multi-process regulation.SnRK1 metabolic regulator system.SnRK1 kinase complex.beta regulatory subunit


Gene families : OG0000948 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000948_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00043530

Target Alias Description ECC score Gene Family Method Actions
Adi_g056427 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.02 OrthoFinder output from all 47 species
Adi_g116993 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.02 OrthoFinder output from all 47 species
Aev_g02114 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.04 OrthoFinder output from all 47 species
Als_g02391 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.03 OrthoFinder output from all 47 species
Cba_g66817 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.02 OrthoFinder output from all 47 species
Dcu_g04300 No alias regulatory subunit beta of SnRK1 kinase complex &... 0.02 OrthoFinder output from all 47 species
LOC_Os09g20010.1 LOC_Os09g20010 regulatory subunit beta of SNF1-related SnRK1 kinase... 0.04 OrthoFinder output from all 47 species
Lfl_g05452 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.03 OrthoFinder output from all 47 species
MA_211932g0010 No alias regulatory subunit beta of SNF1-related SnRK1 kinase... 0.03 OrthoFinder output from all 47 species
Msp_g08209 No alias regulatory subunit beta of SnRK1 kinase complex &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0143.g022922 No alias regulatory subunit beta of SnRK1 kinase complex &... 0.02 OrthoFinder output from all 47 species
Sam_g12681 No alias regulatory subunit beta of SnRK1 kinase complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e003590_P001 Zm00001e003590 regulatory subunit beta of SNF1-related SnRK1 kinase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006828 ASC_dom 65 142
No external refs found!