AMTR_s00008p00250560 (ATCOX6B2, COX6B,...)

Aliases : ATCOX6B2, COX6B, evm_27.TU.AmTr_v1.0_scaffold00008.186

Description : Cellular respiration.oxidative phosphorylation.cytochrome c oxidase complex.components.COX6b component

Gene families : OG0001692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001692_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00008p00250560

Target	Alias	Description	ECC score	Gene Family Method
AT1G22450	ATCOX6B2, COX6B	cytochrome C oxidase 6B	0.04	OrthoFinder output from all 47 species
Adi_g023574	No alias	component *(COX6b) of cytochrome c oxidase complex &...	0.02	OrthoFinder output from all 47 species
Adi_g115468	ATCOX6B2, COX6B	component *(COX6b) of cytochrome c oxidase complex &...	0.03	OrthoFinder output from all 47 species
Als_g56020	No alias	component *(COX6b) of cytochrome c oxidase complex &...	0.06	OrthoFinder output from all 47 species
Aop_g28041	ATCOX6B2, COX6B	component *(COX6b) of cytochrome c oxidase complex &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene69679.t1	ATCOX6B2, COX6B,...	component *(COX6b) of cytochrome c oxidase complex &...	0.02	OrthoFinder output from all 47 species
Cba_g70710	No alias	component *(COX6b) of cytochrome c oxidase complex &...	0.03	OrthoFinder output from all 47 species
Cre06.g304350	ATCOX6B2, COX6B	Cellular respiration.oxidative...	0.01	OrthoFinder output from all 47 species
Dcu_g22192	No alias	component *(COX6b) of cytochrome c oxidase complex &...	0.02	OrthoFinder output from all 47 species
GSVIVT01023725001	No alias	Cellular respiration.oxidative...	0.04	OrthoFinder output from all 47 species
GSVIVT01032620001	ATCOX6B2, COX6B	Cellular respiration.oxidative...	0.01	OrthoFinder output from all 47 species
LOC_Os03g27290.1	ATCOX6B2, COX6B,...	component COX6b of cytochrome c oxidase complex	0.07	OrthoFinder output from all 47 species
Lfl_g29825	ATCOX6B2, COX6B	component *(COX6b) of cytochrome c oxidase complex &...	0.04	OrthoFinder output from all 47 species
Nbi_g40297	ATCOX6B2, COX6B	component *(COX6b) of cytochrome c oxidase complex &...	0.01	OrthoFinder output from all 47 species
Ore_g07261	No alias	component *(COX6b) of cytochrome c oxidase complex &...	0.02	OrthoFinder output from all 47 species
Spa_g17081	ATCOX6B2, COX6B	component *(COX6b) of cytochrome c oxidase complex &...	0.03	OrthoFinder output from all 47 species
Spa_g30721	ATCOX6B2, COX6B	component *(COX6b) of cytochrome c oxidase complex &...	0.03	OrthoFinder output from all 47 species
Zm00001e022949_P001	Zm00001e022949	component COX6b of cytochrome c oxidase complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004129	cytochrome-c oxidase activity	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IEA	Interproscan
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
MF	GO:0009055	electron transfer activity	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005496	steroid binding	IEP	HCCA
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
MF	GO:0032934	sterol binding	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003213	Cyt_c_oxidase_su6B	81	128

External Links

No external refs found!

AMTR_s00008p00250560 (ATCOX6B2, COX6B,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation