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  5. AMTR_s00008p00194190

AMTR_s00008p00194190 (HA6, AHA6,...)


Aliases : HA6, AHA6, evm_27.TU.AmTr_v1.0_scaffold00008.112

Description : Plasma membrane ATPase OS=Oryza sativa subsp. japonica


Gene families : OG0008585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00008p00194190
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Als_g14694 AHA10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_14318 AHA10 Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia... 0.04 OrthoFinder output from all 47 species
MA_102379g0010 No alias Calcium-transporting ATPase 3, endoplasmic... 0.06 OrthoFinder output from all 47 species
Msp_g24489 AHA7, HA7 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008381 mechanosensitive monoatomic ion channel activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR004014 ATPase_P-typ_cation-transptr_N 82 141
IPR008250 ATPase_P-typ_transduc_dom_A_sf 153 391
IPR023214 HAD_sf 396 698
No external refs found!