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  5. AMTR_s00007p00269020

AMTR_s00007p00269020 (BGAL7,...)


Aliases : BGAL7, evm_27.TU.AmTr_v1.0_scaffold00007.399

Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase


Gene families : OG0000377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00269020

Target Alias Description ECC score Gene Family Method Actions
AT5G20710 BGAL7 beta-galactosidase 7 0.03 OrthoFinder output from all 47 species
AT5G56870 BGAL4 beta-galactosidase 4 0.02 OrthoFinder output from all 47 species
GSVIVT01008835001 BGAL16 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.05 OrthoFinder output from all 47 species
Gb_12091 BGAL1 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
LOC_Os03g15020.1 BGAL8, LOC_Os03g15020 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
Len_g09086 BGAL1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07283 BGAL9 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19244 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019757_P001 BGAL15, Zm00001e019757 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR001944 Glycoside_Hdrlase_35 31 334
IPR000922 Lectin_gal-bd_dom 745 823
No external refs found!