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  5. AMTR_s00007p00258170

AMTR_s00007p00258170 (GATL3,...)


Aliases : GATL3, evm_27.TU.AmTr_v1.0_scaffold00007.310

Description : Cell wall.hemicellulose.xylan.synthesis.galacturonosyltransferase


Gene families : OG0000478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00258170
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT3G06260 GATL4 galacturonosyltransferase-like 4 0.02 OrthoFinder output from all 47 species
AT3G28340 GATL10 galacturonosyltransferase-like 10 0.05 OrthoFinder output from all 47 species
Adi_g011441 GATL7 galacturonosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g034393 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03280 GATL7 galacturonosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g12629 GATL3 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17428 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g31450 GATL3 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05607 GATL4 galacturonosyltransferase & original description: none 0.08 OrthoFinder output from all 47 species
Als_g17042 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14506 GATL7 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09248 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21802 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12550.t1 GATL7, Aspi01Gene12550 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35145.t1 GATL7, Aspi01Gene35145 galacturonosyltransferase & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene68499.t1 GATL7, Aspi01Gene68499 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68959.t2 GATL4, Aspi01Gene68959 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14305 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G001800.1 GATL3, Ceric.14G001800 galacturonosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G074700.1 GATL10, Ceric.20G074700 galacturonosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G087900.1 GATL3, Ceric.20G087900 galacturonosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g08288 GATL3 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12360 GATL7 galacturonosyltransferase & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g22076 GATL7 galacturonosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g32660 GATL5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36573 GATL7 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09474 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47476 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11852 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05810 GATL3 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06147 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09040 GATL3 galacturonosyltransferase & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01009639001 No alias Cell wall.hemicellulose.xylan.synthesis.galacturonosyltransferase 0.04 OrthoFinder output from all 47 species
GSVIVT01011066001 GATL4 Probable galacturonosyltransferase-like 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01011949001 No alias Probable galacturonosyltransferase-like 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032581001 GATL8, LGT9 Probable galacturonosyltransferase-like 8 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
Gb_30431 GATL3 galacturonosyltransferase 0.08 OrthoFinder output from all 47 species
Gb_37205 GATL7 galacturonosyltransferase 0.09 OrthoFinder output from all 47 species
LOC_Os02g50600.1 GATL9, LGT8,... galacturonosyltransferase 0.12 OrthoFinder output from all 47 species
LOC_Os03g47530.1 GLZ1, GATL1,... galacturonosyltransferase 0.04 OrthoFinder output from all 47 species
LOC_Os04g44850.1 GATL3, LOC_Os04g44850 galacturonosyltransferase 0.03 OrthoFinder output from all 47 species
Len_g10093 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19113 GATL7 galacturonosyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g15956 GATL3 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429227g0010 GATL3 Probable galacturonosyltransferase-like 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10432403g0010 GATL7 galacturonosyltransferase 0.05 OrthoFinder output from all 47 species
MA_766299g0010 LGT10, GATL6 galacturonosyltransferase 0.03 OrthoFinder output from all 47 species
Mp2g19350.1 GATL7 galacturonosyltransferase 0.06 OrthoFinder output from all 47 species
Msp_g47447 GATL7 galacturonosyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g02979 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25286 GATL7 galacturonosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g31598 LGT10, GATL6 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g40150 GATL3 galacturonosyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g44954 GATL7 galacturonosyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g44955 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g14559 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18339 GATL3 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24913 GATL7 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g004971 GATL7 galacturonosyltransferase & original description: CDS=1-1182 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005139 GATL10 not classified & original description: CDS=1-1242 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022657 LGT10, GATL6 galacturonosyltransferase & original description: CDS=1-1368 0.02 OrthoFinder output from all 47 species
Solyc02g087350.3.1 GATL10, Solyc02g087350 galacturonosyltransferase 0.12 OrthoFinder output from all 47 species
Solyc09g074080.3.1 GATL4, Solyc09g074080 galacturonosyltransferase 0.03 OrthoFinder output from all 47 species
Spa_g08937 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10107 GATL7 galacturonosyltransferase & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g21492 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21037 GATL7 galacturonosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e001733_P001 GATL4, Zm00001e001733 galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Zm00001e005155_P001 GLZ1, GATL1,... galacturonosyltransferase 0.07 OrthoFinder output from all 47 species
Zm00001e007430_P001 GATL3, Zm00001e007430 galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Zm00001e015772_P001 GATL9, LGT8,... galacturonosyltransferase 0.06 OrthoFinder output from all 47 species
Zm00001e036043_P001 GATL9, LGT8,... galacturonosyltransferase 0.08 OrthoFinder output from all 47 species
Zm00001e038370_P001 GATL7, Zm00001e038370 galacturonosyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 81 339
No external refs found!