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  5. AMTR_s00007p00117820

AMTR_s00007p00117820 (FAD8,...)


Aliases : FAD8, evm_27.TU.AmTr_v1.0_scaffold00007.73

Description : Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.omega-3/omega-6 fatty acid desaturase


Gene families : OG0001987 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001987_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00117820

Target Alias Description ECC score Gene Family Method Actions
Ala_g13689 FAD7, FADD delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Als_g39182 FAD8 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Cba_g57768 FAD7, FADD delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Dac_g39402 FAD7, FADD delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Len_g23336 FAD7, FADD delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Ore_g38317 FAD7, FADD delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Ppi_g56692 FAD7, FADD delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002093 FAD7, FADD delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021863 FAS_N 1 130
IPR005804 FA_desaturase_dom 137 392
No external refs found!