AMTR_s00006p00251960 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.158

No description available

Gene families : OG0001057 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001057_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00006p00251960
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AT1G13635	No alias	DNA glycosylase superfamily protein	0.09	OrthoFinder output from all 47 species
AT1G75090	No alias	DNA glycosylase superfamily protein	0.04	OrthoFinder output from all 47 species
AT5G57970	No alias	DNA glycosylase superfamily protein	0.03	OrthoFinder output from all 47 species
Adi_g008949	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g008950	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g054795	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g20185	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g06581	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g14470	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g37787	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene47871.t1	Aspi01Gene47871	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0173.g055846	No alias	not classified & original description: CDS=1-1386	0.02	OrthoFinder output from all 47 species
Cba_g07359	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.20G003100.1	Ceric.20G003100	not classified & original description: pacid=50566642...	0.04	OrthoFinder output from all 47 species
Ceric.34G042800.1	Ceric.34G042800	not classified & original description: pacid=50623635...	0.03	OrthoFinder output from all 47 species
Dac_g07974	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g08060	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01010060001	No alias	No description available	0.08	OrthoFinder output from all 47 species
GSVIVT01010109001	No alias	No description available	0.08	OrthoFinder output from all 47 species
LOC_Os01g58550.1	LOC_Os01g58550	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
LOC_Os08g38170.1	LOC_Os08g38170	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species
LOC_Os09g25290.1	LOC_Os09g25290	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Len_g19792	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g04057	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g01344	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g31518	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g15736	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g30259	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g082120.3.1	Solyc02g082120	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Solyc05g010800.3.1	Solyc05g010800	no hits & (original description: none)	0.13	OrthoFinder output from all 47 species
Tin_g01074	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g07631	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g14899	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e003412_P001	Zm00001e003412	no hits & (original description: none)	0.11	OrthoFinder output from all 47 species
Zm00001e009836_P001	Zm00001e009836	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
Zm00001e019556_P001	Zm00001e019556	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e034160_P002	Zm00001e034160	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003905	alkylbase DNA N-glycosylase activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006284	base-excision repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	None	Extended
MF	GO:0019104	DNA N-glycosylase activity	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0043733	DNA-3-methylbase glycosylase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005019	Adenine_glyco	7	181

External Links

No external refs found!

AMTR_s00006p00251960 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation