1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00006p00243670

AMTR_s00006p00243670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.123

Description : Protein modification.phosphorylation.atypical kinase families.ABC1 kinase


Gene families : OG0002354 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002354_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00243670
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT3G07700 No alias Protein kinase superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G64940 ATATH13, OSA1,... ABC2 homolog 13 0.04 OrthoFinder output from all 47 species
Adi_g081477 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03406 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22404 No alias ABC1 atypical protein kinase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g02223 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g06048 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04775 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07643 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.29G083900.1 ATATH13, OSA1,... ABC1 atypical protein kinase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.31G066400.1 Ceric.31G066400 not classified & original description: pacid=50574282... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000459.54 No alias Protein modification.phosphorylation.atypical kinase... 0.04 OrthoFinder output from all 47 species
Cre08.g369150 No alias Protein modification.phosphorylation.atypical kinase... 0.03 OrthoFinder output from all 47 species
Cre13.g570350 ATATH13, OSA1,... Protein modification.phosphorylation.atypical kinase... 0.03 OrthoFinder output from all 47 species
Dcu_g03078 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04913 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19102 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g29446 No alias ABC1 atypical protein kinase & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g09241 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15048 No alias Protein ACTIVITY OF BC1 COMPLEX KINASE 7, chloroplastic... 0.03 OrthoFinder output from all 47 species
Gb_35512 ATATH13, OSA1,... protein kinase (ABC1) 0.04 OrthoFinder output from all 47 species
LOC_Os02g36570.1 ATATH13, OSA1,... protein kinase (ABC1) 0.03 OrthoFinder output from all 47 species
Len_g09813 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10500 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15584 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17341 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g20880.1 ATATH13, OSA1,... protein kinase (ABC1) 0.01 OrthoFinder output from all 47 species
Msp_g14864 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24096 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09688 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g19058 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05740 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19960 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04306 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13453 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g14566 ATATH13, OSA1,... ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08334 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19478 No alias ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Smo78366 ATATH13, OSA1,... Protein modification.phosphorylation.atypical kinase... 0.03 OrthoFinder output from all 47 species
Solyc04g054190.3.1 ATATH13, OSA1,... protein kinase (ABC1) 0.04 OrthoFinder output from all 47 species
Solyc07g045420.4.1 Solyc07g045420 protein kinase (ABC1) 0.02 OrthoFinder output from all 47 species
Zm00001e013010_P001 Zm00001e013010 protein kinase (ABC1) 0.07 OrthoFinder output from all 47 species
Zm00001e014904_P001 ATATH13, OSA1,... protein kinase (ABC1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004147 ABC1_dom 240 360
No external refs found!