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  5. AMTR_s00003p00269410

AMTR_s00003p00269410 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.406

No description available


Gene families : OG0001990 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001990_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00269410

Target Alias Description ECC score Gene Family Method Actions
AT1G61340 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
Adi_g056531 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g05503 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aop_g07740 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Aspi01Gene38775.t1 Aspi01Gene38775 substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Dcu_g12393 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g00566 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g13898 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01003188001 No alias F-box protein SKIP27 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Pnu_g26963 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Solyc10g005480.3.1 Solyc10g005480 F-box protein SKIP27 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 103 139
No external refs found!