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  5. AMTR_s00003p00259570

AMTR_s00003p00259570 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.332

Description : F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana


Gene families : OG0010666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00259570
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene38457.t1 Aspi01Gene38457 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g25669 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01006336001 No alias No description available 0.01 OrthoFinder output from all 47 species
Len_g14967 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g39433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008219 cell death IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 118 166
IPR006652 Kelch_1 176 223
No external refs found!