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  5. AMTR_s00003p00124840

AMTR_s00003p00124840 (AtMAN6, MAN6,...)


Aliases : AtMAN6, MAN6, evm_27.TU.AmTr_v1.0_scaffold00003.92

Description : Cell wall.hemicellulose.heteromannan.modification and degradation.endo-beta-1,4-mannanase


Gene families : OG0000482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00124840

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene24035.t1 AtMAN6, MAN6,... endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007927 No alias endo-beta-1,4-mannanase & original description: CDS=171-947 0.03 OrthoFinder output from all 47 species
Ceric.03G063200.1 AtMAN7, MAN7,... endo-beta-1,4-mannanase & original description:... 0.03 OrthoFinder output from all 47 species
MA_10432193g0010 AtMAN7, MAN7 endo-beta-1,4-mannanase 0.03 OrthoFinder output from all 47 species
MA_110162g0010 AtMAN7, MAN7 endo-beta-1,4-mannanase 0.02 OrthoFinder output from all 47 species
Nbi_g42088 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15664 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!