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  5. AMTR_s00003p00052150

AMTR_s00003p00052150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.32

No description available


Gene families : OG0007484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00052150

Target Alias Description ECC score Gene Family Method Actions
AT3G62360 No alias Carbohydrate-binding-like fold 0.05 OrthoFinder output from all 47 species
Adi_g086384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020965.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g25901 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_02734 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g25520.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g15173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g009530.3.1 Solyc06g009530 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e026218_P001 Zm00001e026218 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0008219 cell death IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!