Sequence Description Alias PCC hrr AMTR_s00020p00038010 Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00020.9 0.9667788952929817 1 AMTR_s00009p00247750 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF100/Ydh1 component EMB1265, ATCPSF100, CPSF100, ESP5, evm_27.TU.AmTr_v1.0_scaffold00009.244 0.9640051675164778 2 AMTR_s00071p00058700 CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana PKL, GYM, CHR6, SSL2, CHD3, evm_27.TU.AmTr_v1.0_scaffold00071.33 0.9545774306721787 3 AMTR_s00003p00144740 evm_27.TU.AmTr_v1.0_scaffold00003.116 0.9536262341428756 4 AMTR_s00046p00164820 Protein modification.acetylation.NatC-type N-terminal acetylase complex.NAA35 auxiliary component ATMAK10, MAK10, evm_27.TU.AmTr_v1.0_scaffold00046.88 0.9467919139443233 5 AMTR_s00009p00265450 MLO-like protein 14 OS=Arabidopsis thaliana ATMLO14, MLO14, evm_27.TU.AmTr_v1.0_scaffold00009.382 0.9462307027924592 6 AMTR_s00175p00051190 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00175.23 0.9457055363025025 7 AMTR_s00037p00070040 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00037.19 0.945234263229972 18 AMTR_s00092p00157140 evm_27.TU.AmTr_v1.0_scaffold00092.133 0.9421295179368178 11 AMTR_s00092p00123760 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS53/HIT1 component VPS53, HIT1, ATVPS53, evm_27.TU.AmTr_v1.0_scaffold00092.88 0.9420212634997599 10 AMTR_s00061p00106080 evm_27.TU.AmTr_v1.0_scaffold00061.82 0.9408416681302364 24 AMTR_s00003p00101050 evm_27.TU.AmTr_v1.0_scaffold00003.65 0.9392682791795463 12 AMTR_s00048p00207080 Cytoskeleton.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.TFC-D cofactor TTN1, TFC D, EMB133, CHO, evm_27.TU.AmTr_v1.0_scaffold00048.181 0.9388925977647951 13 AMTR_s00023p00062480 Protein modification.acetylation.NatB-type N-terminal acetylase complex.NAA25 auxiliary component evm_27.TU.AmTr_v1.0_scaffold00023.28 0.9383532167103628 38 AMTR_s00021p00172560 Apoptosis inhibitor 5-like protein API5 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00021.126 0.938263186675114 17 AMTR_s00081p00160620 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.head module.MED17 component evm_27.TU.AmTr_v1.0_scaffold00081.69 0.9377966837850042 22 AMTR_s00095p00045160 Protein unc-13 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.22 0.9377357199677319 17 AMTR_s00017p00239150 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana MAA3, evm_27.TU.AmTr_v1.0_scaffold00017.210 0.9362268702406871 18 AMTR_s00142p00102260 Protein modification.acetylation.NatA-type N-terminal acetylase complex.NAA15 auxiliary component EMB2753, evm_27.TU.AmTr_v1.0_scaffold00142.67 0.9357703398122943 53 AMTR_s00110p00037960 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SMARCAL1-like group.SMARCAL1 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00110.12 0.9353968602792461 82 AMTR_s00166p00033890 Pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00166.16 0.9353311665466143 21 AMTR_s00049p00219600 evm_27.TU.AmTr_v1.0_scaffold00049.255 0.9344862167948265 22 AMTR_s00029p00198530 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC3/TTN7 component TTN7, SMC3, evm_27.TU.AmTr_v1.0_scaffold00029.274 0.9337119396688213 23 AMTR_s00029p00164810 evm_27.TU.AmTr_v1.0_scaffold00029.213 0.9334803515128667 24 AMTR_s00013p00135450 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase SYCO ARATH, evm_27.TU.AmTr_v1.0_scaffold00013.66 0.9333517949095752 25 AMTR_s00010p00163020 DNA damage response.DNA repair mechanisms.nucleotide excision repair (NER).DNA repair protein (RAD4) RAD4, ATRAD4, evm_27.TU.AmTr_v1.0_scaffold00010.125 0.9329722739606401 26 AMTR_s00049p00084680 Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.extensins (EXTs).glycosylation.EXT serine O-alpha-galactosyltransferase evm_27.TU.AmTr_v1.0_scaffold00049.55 0.9328693653561952 27 AMTR_s00025p00208510 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN13 regulatory component RPN13, evm_27.TU.AmTr_v1.0_scaffold00025.272 0.9322373971803145 28 AMTR_s00059p00133780 Protein modification.N-linked glycosylation.oligosaccharyl transferase (OST) complex.DGL1 component DGL1, evm_27.TU.AmTr_v1.0_scaffold00059.112 0.9306142257756187 29 AMTR_s00106p00098180 evm_27.TU.AmTr_v1.0_scaffold00106.68 0.9305358506118103 43 AMTR_s00155p00036470 evm_27.TU.AmTr_v1.0_scaffold00155.17 0.9293498168270646 31 AMTR_s00006p00264510 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB5 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00006.267 0.9291312452655466 32 AMTR_s00086p00165640 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor PKL, GYM, CHR6, SSL2, CHD3, evm_27.TU.AmTr_v1.0_scaffold00086.104 0.9277765923452038 48 AMTR_s00002p00090480 evm_27.TU.AmTr_v1.0_scaffold00002.47 0.9274874190911641 34 AMTR_s00025p00035780 evm_27.TU.AmTr_v1.0_scaffold00025.13 0.9272925059802544 35 AMTR_s00033p00224700 BEACH domain-containing protein B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.211 0.9271477115693241 55 AMTR_s00040p00179700 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst CYP71, evm_27.TU.AmTr_v1.0_scaffold00040.171 0.9270433020408881 37 AMTR_s00029p00208280 Cell wall.sporopollenin.exine wall formation.DEX1 exine patterning factor DEX1, evm_27.TU.AmTr_v1.0_scaffold00029.300 0.9269667578537226 38 AMTR_s00071p00153630 Ran-binding protein M homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.142 0.9253486364928436 39 AMTR_s00022p00221290 Clustered mitochondria protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.278 0.9252061851151911 41 AMTR_s00036p00071330 Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00036.25 0.924975301441966 42 AMTR_s00009p00184050 Protein modification.ADP-ribosylation.poly(ADP-ribose) polymerase (PARP) ATPARP2, PARP2, evm_27.TU.AmTr_v1.0_scaffold00009.114 0.9246070225745351 43 AMTR_s00025p00149970 DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).LIG4-XRCC4 ligase complex.LIG4 DNA ligase component ATLIG4, LIG4, evm_27.TU.AmTr_v1.0_scaffold00025.169 0.9240670895197032 44 AMTR_s00081p00125870 evm_27.TU.AmTr_v1.0_scaffold00081.45 0.9237476817715674 45 AMTR_s00045p00076020 RNA biosynthesis.transcriptional activation.SBP transcription factor SPL1, evm_27.TU.AmTr_v1.0_scaffold00045.66 0.9236341014689146 46 AMTR_s00032p00047690 evm_27.TU.AmTr_v1.0_scaffold00032.26 0.9236044237670425 47 AMTR_s00016p00071200 evm_27.TU.AmTr_v1.0_scaffold00016.35 0.9219737353824875 48 AMTR_s00077p00055540 MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana CAD1, evm_27.TU.AmTr_v1.0_scaffold00077.32 0.9216983206868516 49 AMTR_s00003p00241010 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.MAP-kinase phosphatase PHS1, evm_27.TU.AmTr_v1.0_scaffold00003.257 0.9216724273743662 60 AMTR_s00032p00092390 Vesicle trafficking.target membrane tethering.Exocyst complex.EXO84 component evm_27.TU.AmTr_v1.0_scaffold00032.58 0.9214359975699307 51 AMTR_s00041p00161550 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.Hsp90 protein AtHsp90.7, HSP90.7, AtHsp90-7, SHD, evm_27.TU.AmTr_v1.0_scaffold00041.114 0.9211710049003717 52 AMTR_s00052p00172760 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS35 component VPS35B, evm_27.TU.AmTr_v1.0_scaffold00052.82 0.9210738137232073 53 AMTR_s00119p00132020 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class IV ARF-GAP protein ZIGA4, AGD14, evm_27.TU.AmTr_v1.0_scaffold00119.107 0.9209991942917757 68 AMTR_s00017p00192140 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00017.112 0.9206053178448371 91 AMTR_s00036p00173790 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00036.85 0.9204498020544183 56 AMTR_s00095p00175220 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP68 component evm_27.TU.AmTr_v1.0_scaffold00095.153 0.9202770331625928 57 AMTR_s00039p00148640 Cell cycle.cytokinesis.preprophase microtubule organization.CLASP microtubule orientation regulator ATCLASP, CLASP, evm_27.TU.AmTr_v1.0_scaffold00039.100 0.9199573305915624 97 AMTR_s00057p00122610 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC3 component SCC3, ATSCC3, evm_27.TU.AmTr_v1.0_scaffold00057.101 0.9194629324091294 59 AMTR_s00003p00122400 Lipid metabolism.lipid degradation.fatty acid degradation.alternative beta-oxidation.monofunctionial hydroxyacyl-CoA dehydrogenase IBR3, evm_27.TU.AmTr_v1.0_scaffold00003.89 0.9194111374998978 60 AMTR_s00131p00040500 Small RNA degrading nuclease 3 OS=Arabidopsis thaliana SDN3, evm_27.TU.AmTr_v1.0_scaffold00131.25 0.91878930793797 61 AMTR_s00101p00092980 ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana FAS4, ATFAS4, evm_27.TU.AmTr_v1.0_scaffold00101.70 0.9183714226370548 64 AMTR_s00072p00067600 Ubiquitin carboxyl-terminal hydrolase 14 OS=Arabidopsis thaliana ATUBP14, TTN6, PER1, UBP14, evm_27.TU.AmTr_v1.0_scaffold00072.29 0.9177207171874245 65 AMTR_s00030p00083820 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii LRS1, evm_27.TU.AmTr_v1.0_scaffold00030.33 0.9174311669497986 89 AMTR_s00142p00022670 EMB1895, evm_27.TU.AmTr_v1.0_scaffold00142.6 0.9173955028078677 68 AMTR_s00011p00229900 evm_27.TU.AmTr_v1.0_scaffold00011.109 0.917112400631728 69 AMTR_s00002p00269010 evm_27.TU.AmTr_v1.0_scaffold00002.545 0.9168510274642448 70 AMTR_s00016p00133200 evm_27.TU.AmTr_v1.0_scaffold00016.91 0.9168001827582979 78 AMTR_s00025p00231520 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.CG1 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00025.337 0.9167619646725604 72 AMTR_s00087p00144100 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00087.47 0.916351471328822 73 AMTR_s00057p00185220 Probable serine/threonine-protein phosphatase 2A regulatory subunit B subunit TON2 OS=Arabidopsis thaliana GDO, FASS 2, EMB40, TON2, FASS, FS1, evm_27.TU.AmTr_v1.0_scaffold00057.200 0.9159526531677277 74 AMTR_s00034p00133850 evm_27.TU.AmTr_v1.0_scaffold00034.40 0.9158571884075107 83 AMTR_s00106p00107190 evm_27.TU.AmTr_v1.0_scaffold00106.78 0.9153451874341404 77 AMTR_s00029p00058780 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.53 0.9152143780570525 78 AMTR_s00049p00194600 evm_27.TU.AmTr_v1.0_scaffold00049.205 0.9151368527821571 79 AMTR_s00110p00073830 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp2 RNA helicase ESP3, EMB2733, evm_27.TU.AmTr_v1.0_scaffold00110.39 0.9151100334955921 80 AMTR_s00119p00089670 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GC6-type golgin GC6, MAG4, evm_27.TU.AmTr_v1.0_scaffold00119.69 0.9151067826592981 81 AMTR_s00002p00118630 evm_27.TU.AmTr_v1.0_scaffold00002.74 0.9145217633305481 82 AMTR_s00030p00056570 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC5 component SEC5A, evm_27.TU.AmTr_v1.0_scaffold00030.27 0.9144946113953263 83 AMTR_s00110p00131760 Solute transport.primary active transport.P-type ATPase superfamily.P5 family.MIA P5-type cation-transporting ATPase PDR2, MIA, evm_27.TU.AmTr_v1.0_scaffold00110.106 0.9140452546287892 84 AMTR_s00037p00181430 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB activating E1 complex.small component (AXR1/AXL) AXR1, evm_27.TU.AmTr_v1.0_scaffold00037.87 0.9139874155259302 85 AMTR_s00049p00023780 evm_27.TU.AmTr_v1.0_scaffold00049.12 0.9139699121553538 86 AMTR_s00155p00060250 evm_27.TU.AmTr_v1.0_scaffold00155.33 0.9138399466132008 87 AMTR_s00025p00212870 Protein biosynthesis.aminoacyl-tRNA synthetase activities.aspartate-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00025.284 0.913610818597518 88 AMTR_s00040p00223590 DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00040.260 0.9134716834081563 90 AMTR_s00005p00204930 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component SYN3, ATRAD21.2, ATSYN3, evm_27.TU.AmTr_v1.0_scaffold00005.82 0.9134034677122573 91 AMTR_s00024p00121650 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase evm_27.TU.AmTr_v1.0_scaffold00024.71 0.9124553574067811 93 AMTR_s00072p00168660 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS54 GARP-specific component ATVPS54, VPS54, evm_27.TU.AmTr_v1.0_scaffold00072.118 0.9124540488292375 94 AMTR_s00004p00140970 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana UBP13, evm_27.TU.AmTr_v1.0_scaffold00004.137 0.9124238915750147 95 AMTR_s00048p00145430 evm_27.TU.AmTr_v1.0_scaffold00048.93 0.912347860863061 96 AMTR_s00099p00147110 EMB140, evm_27.TU.AmTr_v1.0_scaffold00099.133 0.912170526528378 97 AMTR_s00029p00027850 Cytoskeleton.microfilament network.myosin microfilament-based motor protein activities.class VIII myosin ATVIIIA, VIIIA, evm_27.TU.AmTr_v1.0_scaffold00029.10 0.9118282247999678 100