AMTR_s00002p00269010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.545

No description available


Gene families : OG0001760 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001760_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00269010

Target Alias Description ECC score Gene Family Method Actions
Adi_g010461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g057348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38298 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g07932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g61890.1 LOC_Os01g61890 Dirigent protein 17 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g06044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g58293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_51370g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_5303g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Ore_g03839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g35945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14911 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!