Sequence Description Alias PCC hrr AMTR_s00045p00068210 RNA processing.RNA modification.rRNA/tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.TRM734 component evm_27.TU.AmTr_v1.0_scaffold00045.55 0.9526095457650641 22 AMTR_s00023p00029140 RNA biosynthesis.siRNA biogenesis.CLSY1/2 RDR2-polymerase accessory protein CHR42, evm_27.TU.AmTr_v1.0_scaffold00023.7 0.9498209988061556 2 AMTR_s00009p00251110 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT6.2 protease TPP2, evm_27.TU.AmTr_v1.0_scaffold00009.258 0.9429765765284521 20 AMTR_s00110p00037960 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SMARCAL1-like group.SMARCAL1 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00110.12 0.9429343443455346 48 AMTR_s00142p00102260 Protein modification.acetylation.NatA-type N-terminal acetylase complex.NAA15 auxiliary component EMB2753, evm_27.TU.AmTr_v1.0_scaffold00142.67 0.9362529546215669 50 AMTR_s00090p00083520 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp22 RNA helicase evm_27.TU.AmTr_v1.0_scaffold00090.29 0.9359153075516998 38 AMTR_s00071p00058700 CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana PKL, GYM, CHR6, SSL2, CHD3, evm_27.TU.AmTr_v1.0_scaffold00071.33 0.9348799811310421 13 AMTR_s00002p00271330 Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.622 0.934362608870036 26 AMTR_s00026p00019230 DNA repair protein UVH3 OS=Arabidopsis thaliana UVR1, UVH3, evm_27.TU.AmTr_v1.0_scaffold00026.2 0.9342510896804911 41 AMTR_s00146p00080830 RNA biosynthesis.transcriptional activation.PHD finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00146.48 0.93160358554181 56 AMTR_s00049p00115800 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component SDG30, ATX2, evm_27.TU.AmTr_v1.0_scaffold00049.91 0.9309059286775743 53 AMTR_s00056p00038090 RNA processing.ribonuclease activities.RNase Z endoribonuclease TRZ4, evm_27.TU.AmTr_v1.0_scaffold00056.21 0.9304358327116476 41 AMTR_s00061p00215990 Cell cycle.mitosis and meiosis.chromosome segregation.centromere assembly and maintenance.WYRD inner centromere protein evm_27.TU.AmTr_v1.0_scaffold00061.279 0.9303099316340672 13 AMTR_s00030p00120950 PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00030.69 0.9300849311519034 14 AMTR_s00041p00138020 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP160 scaffold nucleoporin SAR1, ATNUP160, NUP160, evm_27.TU.AmTr_v1.0_scaffold00041.97 0.9300537520044138 38 AMTR_s00024p00121650 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase evm_27.TU.AmTr_v1.0_scaffold00024.71 0.9298326081421628 18 AMTR_s00037p00070040 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00037.19 0.929601015980253 78 AMTR_s00041p00141370 evm_27.TU.AmTr_v1.0_scaffold00041.101 0.9279994994674106 37 AMTR_s00065p00048130 DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00065.24 0.9278524143812507 73 AMTR_s00056p00222190 RNA biosynthesis.transcriptional activation.HRT transcription factor ATET2, ET2, evm_27.TU.AmTr_v1.0_scaffold00056.223 0.9278190537499107 20 AMTR_s00081p00160620 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.head module.MED17 component evm_27.TU.AmTr_v1.0_scaffold00081.69 0.9274587730709357 52 AMTR_s00032p00063530 evm_27.TU.AmTr_v1.0_scaffold00032.40 0.9259748206160273 73 AMTR_s00066p00163770 ELF9, evm_27.TU.AmTr_v1.0_scaffold00066.177 0.9252757048296455 23 AMTR_s00058p00185710 evm_27.TU.AmTr_v1.0_scaffold00058.180 0.9246700281573338 24 AMTR_s00086p00165640 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor PKL, GYM, CHR6, SSL2, CHD3, evm_27.TU.AmTr_v1.0_scaffold00086.104 0.924414161695429 66 AMTR_s00059p00193620 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase MGO1, TOP1, TOP1ALPHA, evm_27.TU.AmTr_v1.0_scaffold00059.214 0.9241824297514416 75 AMTR_s00087p00144100 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00087.47 0.9232553960889062 39 AMTR_s00049p00011400 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.2 0.9231397919923153 96 AMTR_s00025p00243690 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase evm_27.TU.AmTr_v1.0_scaffold00025.377 0.923023000605651 29 AMTR_s00058p00120430 evm_27.TU.AmTr_v1.0_scaffold00058.82 0.9227177535769927 86 AMTR_s00068p00177220 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDK9 kinase evm_27.TU.AmTr_v1.0_scaffold00068.133 0.9223322898175094 32 AMTR_s00003p00101050 evm_27.TU.AmTr_v1.0_scaffold00003.65 0.921626055520695 56 AMTR_s00055p00187070 Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana EDM2, evm_27.TU.AmTr_v1.0_scaffold00055.116 0.921548722046608 86 AMTR_s00003p00212560 emb1441, evm_27.TU.AmTr_v1.0_scaffold00003.204 0.9213589660701319 35 AMTR_s00119p00089670 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GC6-type golgin GC6, MAG4, evm_27.TU.AmTr_v1.0_scaffold00119.69 0.9212425822192047 36 AMTR_s00002p00261540 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00002.453 0.9212284515989626 94 AMTR_s00061p00213120 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00061.265 0.9207317779053736 99 AMTR_s00155p00075220 evm_27.TU.AmTr_v1.0_scaffold00155.49 0.920645065546975 53 AMTR_s00029p00058780 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.53 0.9205410744894624 41 AMTR_s00147p00073200 evm_27.TU.AmTr_v1.0_scaffold00147.35 0.9204051311448705 42 AMTR_s00049p00194600 evm_27.TU.AmTr_v1.0_scaffold00049.205 0.9202683287607272 43 AMTR_s00007p00224640 GTP-binding protein At2g22870 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.219 0.9194744056177983 85 AMTR_s00029p00164810 evm_27.TU.AmTr_v1.0_scaffold00029.213 0.9194127175322633 76 AMTR_s00002p00250180 RNA biosynthesis.RNA polymerase II-dependent transcription.SPT4/5 transcription elongation factor complex.SPT5 component GTA02, GTA2, evm_27.TU.AmTr_v1.0_scaffold00002.351 0.9192363062739606 47 AMTR_s00013p00247130 Protein modification.O-linked glycosylation.serine/threonine O-linked glycosylation.SEC N-acetylglucosamine transferase SEC, evm_27.TU.AmTr_v1.0_scaffold00013.214 0.9188293805508768 86 AMTR_s00055p00198590 Protein modification.phosphorylation.STE kinase superfamily.MAP4K kinase SIK1, evm_27.TU.AmTr_v1.0_scaffold00055.138 0.9188269539588627 49 AMTR_s00032p00104970 DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana HVT1, ATVT-1, evm_27.TU.AmTr_v1.0_scaffold00032.66 0.918149590330949 50 AMTR_s00021p00172560 Apoptosis inhibitor 5-like protein API5 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00021.126 0.9180548447328644 68 AMTR_s00023p00028640 SNF2 domain-containing protein CLASSY 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00023.6 0.9169004142990094 54 AMTR_s00003p00052150 evm_27.TU.AmTr_v1.0_scaffold00003.32 0.9168510274642448 70 AMTR_s00159p00062070 RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.AP2-type transcription factor evm_27.TU.AmTr_v1.0_scaffold00159.24 0.91681667707606 56 AMTR_s00163p00014030 Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00163.1 0.9165092906008175 60 AMTR_s00048p00207080 Cytoskeleton.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.TFC-D cofactor TTN1, TFC D, EMB133, CHO, evm_27.TU.AmTr_v1.0_scaffold00048.181 0.9164116879558724 58 AMTR_s00133p00115730 Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana AAE18, evm_27.TU.AmTr_v1.0_scaffold00133.60 0.9163225507870462 67 AMTR_s00020p00234520 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease ATUBP5, UBP5, PDE323, evm_27.TU.AmTr_v1.0_scaffold00020.106 0.9154653917207197 83 AMTR_s00034p00133850 evm_27.TU.AmTr_v1.0_scaffold00034.40 0.9145729473220358 95 AMTR_s00009p00253500 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00009.266 0.9142143344196888 90 AMTR_s00061p00167160 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIf basal transcription factor complex.alpha subunit ATRAP74, RAP74, evm_27.TU.AmTr_v1.0_scaffold00061.171 0.9141380290144373 66 AMTR_s02210p00008540 AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold02210.1 0.9140993750466344 67 AMTR_s00057p00122610 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC3 component SCC3, ATSCC3, evm_27.TU.AmTr_v1.0_scaffold00057.101 0.9139813425589994 68 AMTR_s00044p00091520 Callose synthase 9 OS=Arabidopsis thaliana ATGSL10, gsl10, CALS9, evm_27.TU.AmTr_v1.0_scaffold00044.64 0.9138409995597968 69 AMTR_s00069p00204310 evm_27.TU.AmTr_v1.0_scaffold00069.223 0.9137175294981174 70 AMTR_s00010p00217580 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.ACINUS component evm_27.TU.AmTr_v1.0_scaffold00010.224 0.9130894006924569 72 AMTR_s00025p00188170 RNA processing.RNA splicing.U12-type-intron-specific minor spliceosome.U11 small nuclear ribonucleoprotein particle (snRNP).U11-59K snRNP component evm_27.TU.AmTr_v1.0_scaffold00025.229 0.9130649638595257 73 AMTR_s00056p00165600 Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana SRO5, evm_27.TU.AmTr_v1.0_scaffold00056.145 0.9129388984283492 74 AMTR_s00058p00123890 evm_27.TU.AmTr_v1.0_scaffold00058.86 0.9128531024173123 76 AMTR_s00071p00110320 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00071.85 0.912586833189381 77 AMTR_s00025p00140350 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component evm_27.TU.AmTr_v1.0_scaffold00025.148 0.912485453253458 80 AMTR_s00024p00216120 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP7 assembly factor evm_27.TU.AmTr_v1.0_scaffold00024.201 0.9123309802783177 81 AMTR_s00016p00071200 evm_27.TU.AmTr_v1.0_scaffold00016.35 0.9121610879923674 82 AMTR_s00039p00226980 PRP39, evm_27.TU.AmTr_v1.0_scaffold00039.208 0.9116196537049197 84 AMTR_s00045p00168580 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class I/Ez histone methyltransferase component SDG10, EZA1, SWN, evm_27.TU.AmTr_v1.0_scaffold00045.200 0.911424278010684 86 AMTR_s00004p00121730 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.107 0.9109899850691298 87 AMTR_s00071p00144670 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.UAfT nucleotide sugar transporter evm_27.TU.AmTr_v1.0_scaffold00071.130 0.9109628575437874 88 AMTR_s00016p00255820 RNA biosynthesis.transcriptional activation.FAR1 transcription factor FRS5, evm_27.TU.AmTr_v1.0_scaffold00016.335 0.9107866402761925 89 AMTR_s00025p00230510 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.334 0.9107320291196725 90 AMTR_s00106p00107190 evm_27.TU.AmTr_v1.0_scaffold00106.78 0.9106199788426286 96 AMTR_s00008p00203230 Protein argonaute 16 OS=Oryza sativa subsp. japonica AGO6, evm_27.TU.AmTr_v1.0_scaffold00008.123 0.9101682685428999 92 AMTR_s00001p00249260 evm_27.TU.AmTr_v1.0_scaffold00001.310 0.9100221941892245 94 AMTR_s00147p00096980 evm_27.TU.AmTr_v1.0_scaffold00147.53 0.9098932650510032 96 AMTR_s00065p00174980 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00065.145 0.9094877950549822 97 AMTR_s00155p00036470 evm_27.TU.AmTr_v1.0_scaffold00155.17 0.9094129495706232 98 AMTR_s00003p00269660 evm_27.TU.AmTr_v1.0_scaffold00003.413 0.9093335073429931 99