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  5. AMTR_s00002p00267790

AMTR_s00002p00267790 (NDH18,...)


Aliases : NDH18, evm_27.TU.AmTr_v1.0_scaffold00002.530

Description : Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB5/NDH18 component


Gene families : OG0008300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00267790

Target Alias Description ECC score Gene Family Method Actions
AT5G43750 NDH18 NAD(P)H dehydrogenase 18 0.09 OrthoFinder output from all 47 species
Aev_g02431 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
Ala_g17202 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.07 OrthoFinder output from all 47 species
Als_g07854 NDH18 component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.05 OrthoFinder output from all 47 species
Aob_g02633 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
Aop_g04082 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene54975.t1 NDH18, Aspi01Gene54975 component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0050.g030970 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.09 OrthoFinder output from all 47 species
Cba_g27058 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.05 OrthoFinder output from all 47 species
Ceric.14G064300.1 Ceric.14G064300 component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
Dac_g03604 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.06 OrthoFinder output from all 47 species
Dcu_g10625 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.07 OrthoFinder output from all 47 species
Dde_g03709 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
Ehy_g00304 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01018092001 NDH18 Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.1 OrthoFinder output from all 47 species
Gb_22200 No alias component PnsB5/NDH18 of NDH subcomplex B 0.06 OrthoFinder output from all 47 species
LOC_Os01g70400.1 NDH18, LOC_Os01g70400 component PnsB5/NDH18 of NDH subcomplex B 0.05 OrthoFinder output from all 47 species
Len_g09904 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.03 OrthoFinder output from all 47 species
Lfl_g12179 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.02 OrthoFinder output from all 47 species
Msp_g10241 NDH18 component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.06 OrthoFinder output from all 47 species
Ore_g00563 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.06 OrthoFinder output from all 47 species
Pir_g10007 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.1 OrthoFinder output from all 47 species
Pnu_g22101 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
Ppi_g01810 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025789 No alias Trihelix-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g09470 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
Sam_g25114 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
Smo412627 NDH18 Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.03 OrthoFinder output from all 47 species
Solyc09g083190.3.1 NDH18, Solyc09g083190 component PnsB5/NDH18 of NDH subcomplex B 0.07 OrthoFinder output from all 47 species
Spa_g11055 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.07 OrthoFinder output from all 47 species
Tin_g37061 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.07 OrthoFinder output from all 47 species
Zm00001e018750_P001 NDH18, Zm00001e018750 component PnsB5/NDH18 of NDH subcomplex B 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!