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Aliases : UNE12, evm_27.TU.AmTr_v1.0_scaffold00002.526
Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor
Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00002p00267570 | |
| Cluster | HCCA: Cluster_13 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G29950 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G66470 | RHD6 | ROOT HAIR DEFECTIVE6 | 0.06 | OrthoFinder output from all 47 species | |
| AT2G43010 | SRL2, PIF4, AtPIF4 | phytochrome interacting factor 4 | 0.04 | OrthoFinder output from all 47 species | |
| AT2G43140 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G21330 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G57800 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G00050 | UNE10 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G28790 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G33880 | RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G37800 | ATRSL1, RSL1 | RHD SIX-LIKE 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G50915 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G62610 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G67110 | ALC | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g012121 | HEC2 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g021895 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g085081 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g088431 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g115453 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g07851 | LRL1 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g17433 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18377 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g39005 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07900 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g10601 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12396 | HEC1 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g33936 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g04401 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g28177 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g49595 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g50421 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g31589 | RSL4 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g60014 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g63732 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene28112.t1 | PIF3, POC1,... | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene29543.t2 | Aspi01Gene29543 | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene46202.t1 | Aspi01Gene46202 | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene46202.t2 | Aspi01Gene46202 | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene54623.t1 | LRL3, Aspi01Gene54623 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0038.g026209 | No alias | bHLH-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0104.g044857 | SPT | bHLH-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0482.g073137 | LRL3 | bHLH-type transcription factor & original description: CDS=1-1173 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g01170 | HEC3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15803 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34527 | HEC2 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G038900.1 | LRL3, Ceric.04G038900 | bHLH-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.16G026700.1 | Ceric.16G026700 | regulatory protein (CIB) of blue light perception &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.17G001900.1 | CIB1, Ceric.17G001900 | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G020000.1 | HEC1, Ceric.29G020000 | bHLH-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G068300.1 | Ceric.32G068300 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g03262 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g07111 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g38581 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08844 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g51490 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02749 | PIL5, PIF1 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g05767 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18466 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g31834 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000717001 | UNE12 | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008299001 | BEE3 | External stimuli response.light.UV-A/blue... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01009479001 | HEC1 | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01020814001 | SRL2, PIF4, AtPIF4 | External stimuli response.light.red/far red light.PIF... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01030846001 | RHD6 | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032055001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_07156 | PIF3, POC1, PAP3 | transcription factor (bHLH). PIF red/far-red light... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g55250.1 | LRL3, LOC_Os02g55250 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g41229.1 | LOC_Os04g41229 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g06900.1 | SPT, LOC_Os06g06900 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g08500.1 | LRL3, LOC_Os06g08500 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g30090.1 | RHD6, LOC_Os06g30090 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g41060.1 | LOC_Os06g41060 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g25040.1 | LRL1, LOC_Os09g25040 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g32510.1 | LOC_Os09g32510 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g10068 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g08868 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g40022 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| MA_42080g0010 | CIB1 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g06114 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g11113 | LRL3 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g24040 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g43243 | LRL3 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g01184 | LRL3 | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g03137 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g03697 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g09354 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g19103 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g25662 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g09406 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26644 | LRL3 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g34453 | RSL2 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42592 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01951 | UNE12 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g38111 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g08374 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g09963 | HEC1 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g13591 | LRL3 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g33726 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c20_590V3.1 | CIB5, Pp3c20_590 | cryptochrome-interacting basic-helix-loop-helix 5 | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g28847 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g39212 | RHD6 | bHLH-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g62088 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g63750 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006090 | No alias | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0038.g011925 | HEC2 | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0082.g018070 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g010130.4.1 | Solyc01g010130 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g062690.3.1 | BEE2, Solyc02g062690 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g070880.1.1 | Solyc02g070880 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g093280.2.1 | SPT, Solyc02g093280 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g113560.4.1 | Solyc03g113560 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g119390.4.1 | BEE3, Solyc03g119390 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g077480.3.1 | Solyc04g077480 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g077960.1.1 | RSL2, Solyc04g077960 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g006650.3.1 | Solyc05g006650 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g005400.3.1 | LRL1, Solyc07g005400 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g057710.4.1 | Solyc09g057710 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g005780.3.1 | HEC3, Solyc11g005780 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03670 | RSL2 | bHLH-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g26616 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g33531 | RHD6 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g41645 | RHD6 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g41791 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14851 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g21602 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e000921_P005 | Zm00001e000921 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e009823_P002 | LRL1, Zm00001e009823 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011084_P002 | Zm00001e011084 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011866_P002 | UNE12, Zm00001e011866 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e015045_P002 | Zm00001e015045 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015610_P001 | RHD6, Zm00001e015610 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019392_P001 | Zm00001e019392 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e025656_P001 | RHD6, Zm00001e025656 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034605_P003 | Zm00001e034605 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e035422_P001 | RSL4, Zm00001e035422 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e036318_P001 | LRL1, Zm00001e036318 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e038765_P001 | Zm00001e038765 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0015035 | protein-disulfide reductase activity | IEP | HCCA |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
| BP | GO:0042592 | homeostatic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0045454 | cell redox homeostasis | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |