AMTR_s00002p00226390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.250

No description available


Gene families : OG0000659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000659_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00226390

Target Alias Description ECC score Gene Family Method Actions
Ala_g01910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33575 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027919001 TPR4 No description available 0.05 OrthoFinder output from all 47 species
Len_g07892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_922698g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc03g005710.3.1 Solyc03g005710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g50879 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002463_P001 Zm00001e002463 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!