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  5. AMTR_s00001p00273040

AMTR_s00001p00273040 (ATNRAMP2, NRAMP2,...)


Aliases : ATNRAMP2, NRAMP2, evm_27.TU.AmTr_v1.0_scaffold00001.588

Description : Solute transport.carrier-mediated transport.APC superfamily.NRAMP metal cation transporter


Gene families : OG0000603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000603_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00273040

Target Alias Description ECC score Gene Family Method Actions
Adi_g059005 ATNRAMP4, NRAMP4 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01807 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26408 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46660 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39825.t1 ATNRAMP4,... metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Cre07.g321951 NRAMP6, ATNRAMP6 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
GSVIVT01008827001 PMIT1, NRAMP1, ATNRAMP1 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Msp_g08035 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g20656 No alias metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42288 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g16965 ATNRAMP3, NRAMP3 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012980_P001 PMIT1, NRAMP1,... metal cation transporter (NRAMP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEA Interproscan
BP GO:0006810 transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0008430 selenium binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001046 NRAMP_fam 86 445
No external refs found!