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  5. AMTR_s00001p00105570

AMTR_s00001p00105570 (MYB103, AtMYB103,...)


Aliases : MYB103, AtMYB103, evm_27.TU.AmTr_v1.0_scaffold00001.72

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00105570

Target Alias Description ECC score Gene Family Method Actions
AT1G66380 MYB114, AtMYB114 myb domain protein 114 0.04 OrthoFinder output from all 47 species
AT2G16720 MYB7, ATY49, ATMYB7 myb domain protein 7 0.03 OrthoFinder output from all 47 species
AT2G36890 ATMYB38, MYB38,... Duplicated homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.02 OrthoFinder output from all 47 species
AT3G13890 MYB26, ATMYB26, MS35 myb domain protein 26 0.04 OrthoFinder output from all 47 species
AT5G57620 MYB36, AtMYB36 myb domain protein 36 0.03 OrthoFinder output from all 47 species
AT5G65790 MYB68, ATMYB68 myb domain protein 68 0.03 OrthoFinder output from all 47 species
Aev_g17866 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Als_g49183 ATMYB46, MYB46 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08939 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene30128.t1 AtMYB17, MYB17,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70543.t1 ATMYB101,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001484 AtMYB85, MYB85 not classified & original description: CDS=1-468 0.04 OrthoFinder output from all 47 species
Cba_g76438 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16102 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.02 OrthoFinder output from all 47 species
Dcu_g20359 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Dde_g30947 AtMYB20, MYB20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012447001 MYB33, ATMYB33 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01013735001 MYB66, ATMYB66, WER, WER1 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01016768001 ATMYB4, MYB4 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01016800001 MYB26, ATMYB26, MS35 RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
GSVIVT01028235001 ATMYB61, MYB61 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01029145001 MYB36, AtMYB36 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01031341001 ATMYB61, MYB61 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_09986 AtMYB79, MYB79 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_25814 ATMYB61, MYB61 transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
LOC_Os02g46780.1 MYB58, ATMYB58,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
LOC_Os06g14670.1 AtMYB20, MYB20,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os08g33660.1 ATMIXTA, MYB16,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os09g24800.1 ATMYB94,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_173523g0010 AtMYB17, MYB17 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_278282g0010 MYB3, ATMYB3 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_460508g0010 ATMYB14, MYB14, MYB14AT transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_62488g0010 AtMYB107, MYB107 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_6285g0010 AtMYB17, MYB17 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_80033g0010 MYB84, RAX3, ATMYB84 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Mp3g23170.1 MYB103,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Nbi_g05300 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g46226 ATMYB4, MYB4 MYB class-R2R3 subgroup-4 transcription factor &... 0.06 OrthoFinder output from all 47 species
Ppi_g16425 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003255 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Smo98669 ATMYB5, MYB5 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc03g025870.3.1 MYB19, AtMYB19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc03g121740.3.1 MYB26, ATMYB26,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc05g007710.3.1 MYB106, NOK,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc05g055030.2.1 ATMYB15, ATY19,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc06g053610.3.1 ATMYB15, ATY19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc06g069850.3.1 MYB30, ATMYB30,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc06g074910.3.1 MYB36, AtMYB36,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc07g006750.3.1 MYB36, AtMYB36,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc11g065840.3.1 AtMYB83, MYB83,... transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
Solyc11g069030.3.1 MYB36, AtMYB36,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Spa_g08522 AtMYB18, MYB18 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23787 ATMYB61, MYB61 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26107 AtMYB50, MYB50 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001404_P001 ATMYB12, PFG1,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e001409_P001 ATMYB12, PFG1,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e007904_P001 ATMIXTA, MYB16,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e010546_P001 MYB41, AtMYB41,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Zm00001e019501_P001 ATMYB65, MYB65,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e026166_P001 AtMYB112,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e034072_P001 AtMYB20, MYB20,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e034807_P001 AtMYB42, MYB42,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 111
No external refs found!