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  5. Aev_g03929

Aev_g03929


Description : regulatory E3 ubiquitin ligase (APD) involved in gametogenesis & original description: none


Gene families : OG0001688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001688_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g03929

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273000 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01009392001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_23472 No alias no description available(sp|q6dbh0|apd2_arath : 197.0) 0.03 OrthoFinder output from all 47 species
LOC_Os05g44550.1 LOC_Os05g44550 no description available(sp|q6dbh0|apd2_arath : 110.0) 0.02 OrthoFinder output from all 47 species
Sam_g08699 No alias regulatory E3 ubiquitin ligase (APD) involved in... 0.02 OrthoFinder output from all 47 species
Sam_g28019 No alias regulatory E3 ubiquitin ligase (APD) involved in... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032008 APD1-4_N 88 157
IPR032010 APD1-4_M 183 286
No external refs found!