Aliases : HIS1-3
Description : linker histone *(H1) & original description: none
Gene families : OG0000310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000310_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aev_g03738 | |
Cluster | HCCA: Cluster_147 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre06.g275900 | HIS1-3 | Chromatin organisation.histones.H1 linker histone | 0.01 | OrthoFinder output from all 47 species | |
Gb_40200 | HIS1-3 | linker histone (H1) | 0.02 | OrthoFinder output from all 47 species | |
Len_g54319 | No alias | linker histone *(H1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g09869 | No alias | linker histone *(H1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g17524 | No alias | linker histone *(H1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g31027 | HIS1-3 | linker histone *(H1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e030798_P003 | HON4, Zm00001e030798 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | Interproscan |
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006334 | nucleosome assembly | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
BP | GO:0016485 | protein processing | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0042393 | histone binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0051604 | protein maturation | IEP | HCCA |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005818 | Histone_H1/H5_H15 | 57 | 124 |
No external refs found! |