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  5. Aev_g03275

Aev_g03275


Description : not classified & original description: none


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g03275
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00247110 SKIP4,... F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00211260 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G16250 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g11615 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g57113 AFR substrate adaptor *(SKIP4) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aop_g00656 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ceric.01G085400.1 Ceric.01G085400 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Ceric.19G019100.1 Ceric.19G019100 substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ehy_g00813 SKIP4 substrate adaptor *(SKIP4) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
GSVIVT01015512001 No alias F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_06552 No alias F-box/kelch-repeat protein At1g55270 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_07972 No alias F-box/kelch-repeat protein At1g55270 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_09353 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g10850.1 LOC_Os02g10850 phenylpropanoid biosynthesis regulator (SAGL1) 0.01 OrthoFinder output from all 47 species
Len_g02329 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Len_g13438 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
MA_919958g0010 SKIP6 F-box/kelch-repeat protein SKIP6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g07402 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pir_g35710 SKIP4 substrate adaptor *(SKIP4) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Pnu_g04793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015430 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g29767 No alias substrate adaptor *(SKIP4) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Smo83069 No alias F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g022740.3.1 Solyc01g022740 phenylpropanoid biosynthesis regulator (SAGL1) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 161 222
IPR006652 Kelch_1 108 158
IPR001810 F-box_dom 8 50
No external refs found!