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  5. Dac_g32754

Dac_g32754


Description : not classified & original description: none


Gene families : OG0007043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g32754

Target Alias Description ECC score Gene Family Method Actions
Als_g13386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52662.t1 Aspi01Gene52662 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021493.13 No alias Cactin OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre09.g398650 No alias Cactin OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dde_g08230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10425940g0010 No alias Cactin OS=Arabidopsis thaliana (sp|f4i2j8|catin_arath : 378.0) 0.02 OrthoFinder output from all 47 species
Mp1g18180.1 No alias Cactin OS=Arabidopsis thaliana (sp|f4i2j8|catin_arath : 645.0) 0.02 OrthoFinder output from all 47 species
Spa_g07915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019134 Cactin_C 558 682
IPR018816 Cactin_central 204 401
No external refs found!