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  5. Dac_g31410

Dac_g31410


Description : not classified & original description: none


Gene families : OG0000059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g31410

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00251850 evm_27.TU.AmTr_v1... Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00237p00022130 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT4G36110 No alias SAUR-like auxin-responsive protein family 0.03 OrthoFinder output from all 47 species
Aev_g00668 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g07138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45400.t1 Aspi01Gene45400 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45401.t1 Aspi01Gene45401 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g01422 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g30262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_27169 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_53005g0010 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_7961531g0010 No alias Indole-3-acetic acid-induced protein ARG7 OS=Vigna... 0.03 OrthoFinder output from all 47 species
Mp6g13700.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g11212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g014620.1.1 Solyc07g014620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g009980.3.1 Solyc09g009980 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g018340.1.1 Solyc10g018340 Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g54232 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003676 SAUR_fam 88 159
No external refs found!