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  5. Dac_g29039

Dac_g29039


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g29039

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00258260 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AT3G06770 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G48950 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G23820 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g07714 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23218.t3 Aspi01Gene23218 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g008199 No alias EC_3.2 glycosylase & original description: CDS=411-1772 0.05 OrthoFinder output from all 47 species
Azfi_s0076.g037869 No alias EC_3.2 glycosylase & original description: CDS=133-1653 0.03 OrthoFinder output from all 47 species
Ceric.16G030400.1 Ceric.16G030400 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G027300.1 Ceric.37G027300 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g09827 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26386 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01028860001 No alias Probable polygalacturonase OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
LOC_Os01g43160.1 LOC_Os01g43160 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
LOC_Os09g26800.1 LOC_Os09g26800 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Len_g18502 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08224 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24778 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31187 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06175 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000166 No alias EC_3.2 glycosylase & original description: CDS=1-1656 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007744 No alias EC_3.2 glycosylase & original description: CDS=819-1838 0.03 OrthoFinder output from all 47 species
Sam_g11684 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g042160.3.1 Solyc07g042160 Probable polygalacturonase OS=Vitis vinifera... 0.05 OrthoFinder output from all 47 species
Tin_g10093 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19951 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35244 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023760_P001 Zm00001e023760 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Zm00001e024829_P001 Zm00001e024829 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Zm00001e027889_P004 Zm00001e027889 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009254 peptidoglycan turnover IEP HCCA
MF GO:0009922 fatty acid elongase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 208 487
IPR024535 Pectate_lyase_SF_prot 111 168
No external refs found!